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The map label for this gene is dppD [H]

Identifier: 160902771

GI number: 160902771

Start: 1416475

End: 1417530

Strand: Direct

Name: dppD [H]

Synonym: Pmob_1324

Alternate gene names: 160902771

Gene position: 1416475-1417530 (Clockwise)

Preceding gene: 160902770

Following gene: 160902772

Centisome position: 65.29

GC content: 37.31

Gene sequence:

>1056_bases
TTGAATGATATCATCTTAGACGTTAGAAACATGAGTACTCACTTTCCCGTAGCTGAAGGAACGGTTAAAGCTGTTAATCA
ACTTTCTTTCACTTTGAGTAAAAATGAAACTTTAGGAATCGTTGGTGAAACAGGATCGGGAAAAAGTGTAGCCATGAAGT
CTGTAATGGGGATGATTAAAAGCCCTGGTTATATTACCAAAGAGAGTCAAATATTATTTAAAACAAACGAATTCAGTAAA
GACGGTAAGGAAGAGTTCGTTGATCTGGCAAAATTAAAACAGAAAGATTTTACAAGGATAAGAGGAAAACATATTGGGAT
GGTCTTTCAGGACCCAATGTCTTCTTTGAACCCAATGTTTACAATAGCTGATCAAATGATTGAAACTATTGTTTTTCACC
AAAATGTGTCCATAGAAGAAGCAAGGGAAAGGGCTATAAAACTTTTAGATGATGTAGGGATTGCCAATCCAGCTGAAAGG
ATCGATGACTTTCCCTTCCAGTTTTCAGGTGGTCAAAGGCAAAGGGTAGTAATAGCGATAGGGCTTTCTTGCAATCCAGA
AATTTTAATCGCCGATGAACCTACCACCGCTTTGGATGTTACTATTCAAGCCCAAATTTTAGAGTTGATGAAAGATTTGC
AAAAAGAGTATGATATGGGAATGATATACATAACTCATGACCTCTCTGTAATAGCTGAAGTTGCCGATAAGGTTATTGTA
ATGTATGGTGGAACACAGATGGAAATGACAGATATTTATACACTTTTTGAAAAACCTAGGCATCCATATACCCATGCTCT
GCTTTCCTGTATACCCAGGCACGATATAAAGGTAGATCTATTAAACCCTATAAAAGGTCAACCTCCTGTTATGCTGGATC
CTCCACCATTGTGTCCTTTTTTGCCAAGATGTCCATATGCCACTGATAAGTGTAGGAAAGAATGGCCCGAGTTAACAGAA
GTTGAAGAAAATCATTACATAAGATGTTTCAATCCTATATCTGATACTACTCCTGTTCATTATGACGATGTGATAGATAA
GAAGGAGGCTCTTTGA

Upstream 100 bases:

>100_bases
GACTATTGTTAATTAGTTTTTTTCTACTTGACAATCAAGGTTAATATTTATTATAATATGAAATAGAATTAAAGATTAAT
TATGCTATGAGGTGAATATA

Downstream 100 bases:

>100_bases
TGCTTTTAAAAATCCGTAATCTGAAAAAGTATTTTCCAATTAAACAGGGGTTTTTGATAGATAGAACGGTCGGGTACATT
AAAGCAGTGGATGGGGTCAA

Product: oligopeptide/dipeptide ABC transporter ATPase

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MNDIILDVRNMSTHFPVAEGTVKAVNQLSFTLSKNETLGIVGETGSGKSVAMKSVMGMIKSPGYITKESQILFKTNEFSK
DGKEEFVDLAKLKQKDFTRIRGKHIGMVFQDPMSSLNPMFTIADQMIETIVFHQNVSIEEARERAIKLLDDVGIANPAER
IDDFPFQFSGGQRQRVVIAIGLSCNPEILIADEPTTALDVTIQAQILELMKDLQKEYDMGMIYITHDLSVIAEVADKVIV
MYGGTQMEMTDIYTLFEKPRHPYTHALLSCIPRHDIKVDLLNPIKGQPPVMLDPPPLCPFLPRCPYATDKCRKEWPELTE
VEENHYIRCFNPISDTTPVHYDDVIDKKEAL

Sequences:

>Translated_351_residues
MNDIILDVRNMSTHFPVAEGTVKAVNQLSFTLSKNETLGIVGETGSGKSVAMKSVMGMIKSPGYITKESQILFKTNEFSK
DGKEEFVDLAKLKQKDFTRIRGKHIGMVFQDPMSSLNPMFTIADQMIETIVFHQNVSIEEARERAIKLLDDVGIANPAER
IDDFPFQFSGGQRQRVVIAIGLSCNPEILIADEPTTALDVTIQAQILELMKDLQKEYDMGMIYITHDLSVIAEVADKVIV
MYGGTQMEMTDIYTLFEKPRHPYTHALLSCIPRHDIKVDLLNPIKGQPPVMLDPPPLCPFLPRCPYATDKCRKEWPELTE
VEENHYIRCFNPISDTTPVHYDDVIDKKEAL
>Mature_351_residues
MNDIILDVRNMSTHFPVAEGTVKAVNQLSFTLSKNETLGIVGETGSGKSVAMKSVMGMIKSPGYITKESQILFKTNEFSK
DGKEEFVDLAKLKQKDFTRIRGKHIGMVFQDPMSSLNPMFTIADQMIETIVFHQNVSIEEARERAIKLLDDVGIANPAER
IDDFPFQFSGGQRQRVVIAIGLSCNPEILIADEPTTALDVTIQAQILELMKDLQKEYDMGMIYITHDLSVIAEVADKVIV
MYGGTQMEMTDIYTLFEKPRHPYTHALLSCIPRHDIKVDLLNPIKGQPPVMLDPPPLCPFLPRCPYATDKCRKEWPELTE
VEENHYIRCFNPISDTTPVHYDDVIDKKEAL

Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system. Expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG0444

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9665248, Length=243, Percent_Identity=27.5720164609054, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1789963, Length=332, Percent_Identity=43.6746987951807, Blast_Score=297, Evalue=6e-82,
Organism=Escherichia coli, GI48994883, Length=333, Percent_Identity=41.4414414414414, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI145693107, Length=297, Percent_Identity=43.7710437710438, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1787759, Length=340, Percent_Identity=36.7647058823529, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI1788506, Length=275, Percent_Identity=41.4545454545455, Blast_Score=222, Evalue=2e-59,
Organism=Escherichia coli, GI1789962, Length=350, Percent_Identity=36, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI1787500, Length=341, Percent_Identity=34.6041055718475, Blast_Score=210, Evalue=1e-55,
Organism=Escherichia coli, GI1787548, Length=340, Percent_Identity=33.2352941176471, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1787758, Length=341, Percent_Identity=33.1378299120235, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI48994997, Length=272, Percent_Identity=34.1911764705882, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1789890, Length=246, Percent_Identity=33.739837398374, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1787547, Length=274, Percent_Identity=30.6569343065693, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1786398, Length=286, Percent_Identity=28.3216783216783, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1789891, Length=253, Percent_Identity=30.8300395256917, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788225, Length=236, Percent_Identity=32.6271186440678, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1789032, Length=252, Percent_Identity=28.5714285714286, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786703, Length=245, Percent_Identity=28.9795918367347, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787089, Length=241, Percent_Identity=29.8755186721992, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1790162, Length=260, Percent_Identity=27.3076923076923, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789672, Length=250, Percent_Identity=30, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1786872, Length=233, Percent_Identity=33.0472103004292, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1787029, Length=255, Percent_Identity=29.4117647058824, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1788761, Length=245, Percent_Identity=26.1224489795918, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788644, Length=189, Percent_Identity=33.8624338624339, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI87081834, Length=252, Percent_Identity=26.984126984127, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI87081709, Length=269, Percent_Identity=26.3940520446097, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1789873, Length=225, Percent_Identity=28, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787105, Length=237, Percent_Identity=27.4261603375527, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1787712, Length=252, Percent_Identity=26.1904761904762, Blast_Score=85, Evalue=8e-18,
Organism=Escherichia coli, GI1790534, Length=240, Percent_Identity=28.3333333333333, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788450, Length=271, Percent_Identity=25.0922509225092, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787370, Length=252, Percent_Identity=25, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786345, Length=246, Percent_Identity=26.4227642276423, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789991, Length=255, Percent_Identity=25.8823529411765, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87081791, Length=267, Percent_Identity=25.4681647940075, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786563, Length=237, Percent_Identity=26.5822784810127, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082267, Length=254, Percent_Identity=22.8346456692913, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI48995001, Length=249, Percent_Identity=26.1044176706827, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1790467, Length=244, Percent_Identity=26.2295081967213, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787164, Length=237, Percent_Identity=28.2700421940928, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1789864, Length=252, Percent_Identity=22.2222222222222, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789751, Length=261, Percent_Identity=24.5210727969349, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788165, Length=85, Percent_Identity=35.2941176470588, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786803, Length=106, Percent_Identity=34.9056603773585, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1790544, Length=229, Percent_Identity=22.2707423580786, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=259, Percent_Identity=26.2548262548263, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=258, Percent_Identity=28.2945736434109, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=249, Percent_Identity=28.1124497991968, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=236, Percent_Identity=27.5423728813559, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=236, Percent_Identity=27.5423728813559, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=236, Percent_Identity=27.5423728813559, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=237, Percent_Identity=26.5822784810127, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6319856, Length=225, Percent_Identity=26.2222222222222, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323959, Length=249, Percent_Identity=28.1124497991968, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 39623; Mature: 39623

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDIILDVRNMSTHFPVAEGTVKAVNQLSFTLSKNETLGIVGETGSGKSVAMKSVMGMIK
CCCEEEEECCCCCCCCCCCCHHHHHHHHEEEEECCCEEEEEECCCCCHHHHHHHHHHHHC
SPGYITKESQILFKTNEFSKDGKEEFVDLAKLKQKDFTRIRGKHIGMVFQDPMSSLNPMF
CCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCHHH
TIADQMIETIVFHQNVSIEEARERAIKLLDDVGIANPAERIDDFPFQFSGGQRQRVVIAI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCCCEEEEEEE
GLSCNPEILIADEPTTALDVTIQAQILELMKDLQKEYDMGMIYITHDLSVIAEVADKVIV
ECCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCEEE
MYGGTQMEMTDIYTLFEKPRHPYTHALLSCIPRHDIKVDLLNPIKGQPPVMLDPPPLCPF
EECCCEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCC
LPRCPYATDKCRKEWPELTEVEENHYIRCFNPISDTTPVHYDDVIDKKEAL
CCCCCCCCHHHHHHCCCHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNDIILDVRNMSTHFPVAEGTVKAVNQLSFTLSKNETLGIVGETGSGKSVAMKSVMGMIK
CCCEEEEECCCCCCCCCCCCHHHHHHHHEEEEECCCEEEEEECCCCCHHHHHHHHHHHHC
SPGYITKESQILFKTNEFSKDGKEEFVDLAKLKQKDFTRIRGKHIGMVFQDPMSSLNPMF
CCCEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCHHH
TIADQMIETIVFHQNVSIEEARERAIKLLDDVGIANPAERIDDFPFQFSGGQRQRVVIAI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCCCEEEEEEE
GLSCNPEILIADEPTTALDVTIQAQILELMKDLQKEYDMGMIYITHDLSVIAEVADKVIV
ECCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCEEE
MYGGTQMEMTDIYTLFEKPRHPYTHALLSCIPRHDIKVDLLNPIKGQPPVMLDPPPLCPF
EECCCEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCC
LPRCPYATDKCRKEWPELTEVEENHYIRCFNPISDTTPVHYDDVIDKKEAL
CCCCCCCCHHHHHHCCCHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]