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The map label for this gene is dppA [H]

Identifier: 160901976

GI number: 160901976

Start: 544143

End: 544961

Strand: Direct

Name: dppA [H]

Synonym: Pmob_0500

Alternate gene names: 160901976

Gene position: 544143-544961 (Clockwise)

Preceding gene: 160901975

Following gene: 160901977

Centisome position: 25.08

GC content: 33.82

Gene sequence:

>819_bases
GTGATTATTATAAAAATATACATTTCATTTGATTTTGAAGGGCTTGGGGGTGTCGCCCAATGGAACGATGTCACAAAAGA
TAACAAAGATTACAAACAAACATATGCTGTTAGGCAATTAAAAGCTTTATTAGAAGAATTAAAAGAACATGAGATCATCT
TATCTGATTCCCATGCGGAAGGGAACAACATTCCGTGGGAGATCACAGAAGAATTCCCAAACGTAAAATTAATCAGCGGT
GGGATAAGAAAATATTATATGATGACAGGTATAGATGAATCTTTCGATAGGATGATCTTTTTTGGTTACCATGCTGGAGT
AGGAGAAAAATACTCTACTATGGATCATACTTATTCAAGTTCTTCTATTCATAATATTTGGATCAATGGAATAGAAATGA
ATGAAACGCTAATTAATGCCGCATACGGAGGTAGTTTTGATGTTCCATTGGCAATGGTTGTTGGGGATGATAAACTCAAA
AAACAACTGAACCCATATTTCAAACATTTATACTACGTAGAAACCAAAAGATCTTTAGGCAGATACTCTGCAGAGTTTAA
ACCAATGAAGAAACTACTAGAAGAAATTAAAAGTGCAACTAAAGAAATGAAAGATAAAAACAAAGAATATTTCGATGTTT
ACAGATTCAATTCACCCATCGAGATGATTGTTGAATTTTCTGACACTTCGAAAGCTGATATGGTCGAATCCATGCCATTA
ACAGAAAGAATAGATGGAAGAAAGGTCAAAATAAGCAGCGACAATTATCGTGTGATTTTTGAAGCTCTTTTAGCGATAAC
TTATATATGTGGAGCATAG

Upstream 100 bases:

>100_bases
AGGTGAAAAGAAGGGTTATCTTGCCAACAAAATTAATAATTAGAGATTCAGTCAGAAAAATATAATTTAATGATTTTTTG
ATATAATTATCAATAAAGAG

Downstream 100 bases:

>100_bases
AAAATAAGAGGTGATTAAAATGAGCGAAATACCAACAGATAAAGCGATCTTTGCAGCAGGTTGTTTTTGGGGAGTAGAAT
ACATGTTTAAAAAAGTCGCA

Product: peptidase M55 D-aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIIIKIYISFDFEGLGGVAQWNDVTKDNKDYKQTYAVRQLKALLEELKEHEIILSDSHAEGNNIPWEITEEFPNVKLISG
GIRKYYMMTGIDESFDRMIFFGYHAGVGEKYSTMDHTYSSSSIHNIWINGIEMNETLINAAYGGSFDVPLAMVVGDDKLK
KQLNPYFKHLYYVETKRSLGRYSAEFKPMKKLLEEIKSATKEMKDKNKEYFDVYRFNSPIEMIVEFSDTSKADMVESMPL
TERIDGRKVKISSDNYRVIFEALLAITYICGA

Sequences:

>Translated_272_residues
MIIIKIYISFDFEGLGGVAQWNDVTKDNKDYKQTYAVRQLKALLEELKEHEIILSDSHAEGNNIPWEITEEFPNVKLISG
GIRKYYMMTGIDESFDRMIFFGYHAGVGEKYSTMDHTYSSSSIHNIWINGIEMNETLINAAYGGSFDVPLAMVVGDDKLK
KQLNPYFKHLYYVETKRSLGRYSAEFKPMKKLLEEIKSATKEMKDKNKEYFDVYRFNSPIEMIVEFSDTSKADMVESMPL
TERIDGRKVKISSDNYRVIFEALLAITYICGA
>Mature_272_residues
MIIIKIYISFDFEGLGGVAQWNDVTKDNKDYKQTYAVRQLKALLEELKEHEIILSDSHAEGNNIPWEITEEFPNVKLISG
GIRKYYMMTGIDESFDRMIFFGYHAGVGEKYSTMDHTYSSSSIHNIWINGIEMNETLINAAYGGSFDVPLAMVVGDDKLK
KQLNPYFKHLYYVETKRSLGRYSAEFKPMKKLLEEIKSATKEMKDKNKEYFDVYRFNSPIEMIVEFSDTSKADMVESMPL
TERIDGRKVKISSDNYRVIFEALLAITYICGA

Specific function: Hydrolyzes N-terminal residues in D-amino acid containing peptides. Among the tested substrates, the highest activities are with D-Ala-D-Ala and D-Ala-Gly-Gly. The physiological role is not clear [H]

COG id: COG2362

COG function: function code E; D-aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M55 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007035 [H]

Pfam domain/function: PF04951 Peptidase_M55 [H]

EC number: NA

Molecular weight: Translated: 31392; Mature: 31392

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIKIYISFDFEGLGGVAQWNDVTKDNKDYKQTYAVRQLKALLEELKEHEIILSDSHAE
CEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCC
GNNIPWEITEEFPNVKLISGGIRKYYMMTGIDESFDRMIFFGYHAGVGEKYSTMDHTYSS
CCCCCEEECCCCCCEEEEECCHHEEEEECCCCCCCCCEEEEEEECCCCCCHHHHCCCCCC
SSIHNIWINGIEMNETLINAAYGGSFDVPLAMVVGDDKLKKQLNPYFKHLYYVETKRSLG
CCEEEEEEEEEEECHHEEEHCCCCCCCCCEEEEECCHHHHHHHCHHHHHHEEEEHHHHHH
RYSAEFKPMKKLLEEIKSATKEMKDKNKEYFDVYRFNSPIEMIVEFSDTSKADMVESMPL
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHEEEEECCCCHHHHHHCCCC
TERIDGRKVKISSDNYRVIFEALLAITYICGA
HHCCCCCEEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIIKIYISFDFEGLGGVAQWNDVTKDNKDYKQTYAVRQLKALLEELKEHEIILSDSHAE
CEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCC
GNNIPWEITEEFPNVKLISGGIRKYYMMTGIDESFDRMIFFGYHAGVGEKYSTMDHTYSS
CCCCCEEECCCCCCEEEEECCHHEEEEECCCCCCCCCEEEEEEECCCCCCHHHHCCCCCC
SSIHNIWINGIEMNETLINAAYGGSFDVPLAMVVGDDKLKKQLNPYFKHLYYVETKRSLG
CCEEEEEEEEEEECHHEEEHCCCCCCCCCEEEEECCHHHHHHHCHHHHHHEEEEHHHHHH
RYSAEFKPMKKLLEEIKSATKEMKDKNKEYFDVYRFNSPIEMIVEFSDTSKADMVESMPL
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHEEEEECCCCHHHHHHCCCC
TERIDGRKVKISSDNYRVIFEALLAITYICGA
HHCCCCCEEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]