| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is glpE [H]
Identifier: 160877583
GI number: 160877583
Start: 5294502
End: 5294807
Strand: Direct
Name: glpE [H]
Synonym: Sbal195_4482
Alternate gene names: 160877583
Gene position: 5294502-5294807 (Clockwise)
Preceding gene: 160877582
Following gene: 160877584
Centisome position: 99.01
GC content: 47.39
Gene sequence:
>306_bases ATGTCTTCCTTTAAACACTTAAGCGTTAATCAATTGCTGCAAATGACCGAAGCACAGCCAGTGCAAATCGTCGATATCCG CGATGGCAATAGCTTCACCAACGGCCATATTGCAGGTGCAACTAACCTGAATAACGAAAACCTAGCGCAATTTATTAGCC AAGCCGATATGGACAGCCCACTGGTAGTGGTTTGTTACCACGGTATGAGCAGCCAAAATGCGGCGCAGTATTTATGCGAG CAAGGGTTTGATGACGTTTACAGTCTAGACGGCGGCTATAGCGCCTGGCATGAGGCAAATGCATGA
Upstream 100 bases:
>100_bases CCTGCAGAGCATTACTTAGATAGGGGCTGTACACTCGCAGCCCCTTGTTGCACACTTATCCCATCTTGATTTCCATCTCT TAGCTTTGTCAGGTTTTATT
Downstream 100 bases:
>100_bases TAGAAATTGGCCGACTCCCCAACAGTAGAGCCGCGCAGGCATTTGTCGATTACCTCAAAGGTGAACACATTGACTGCCAA ATTGAGCCGCTGGAGCAAGG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSSFKHLSVNQLLQMTEAQPVQIVDIRDGNSFTNGHIAGATNLNNENLAQFISQADMDSPLVVVCYHGMSSQNAAQYLCE QGFDDVYSLDGGYSAWHEANA
Sequences:
>Translated_101_residues MSSFKHLSVNQLLQMTEAQPVQIVDIRDGNSFTNGHIAGATNLNNENLAQFISQADMDSPLVVVCYHGMSSQNAAQYLCE QGFDDVYSLDGGYSAWHEANA >Mature_100_residues SSFKHLSVNQLLQMTEAQPVQIVDIRDGNSFTNGHIAGATNLNNENLAQFISQADMDSPLVVVCYHGMSSQNAAQYLCEQ GFDDVYSLDGGYSAWHEANA
Specific function: Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide [H]
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Escherichia coli, GI1789831, Length=98, Percent_Identity=44.8979591836735, Blast_Score=95, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 11042; Mature: 10911
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFKHLSVNQLLQMTEAQPVQIVDIRDGNSFTNGHIAGATNLNNENLAQFISQADMDSP CCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCC LVVVCYHGMSSQNAAQYLCEQGFDDVYSLDGGYSAWHEANA EEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure SSFKHLSVNQLLQMTEAQPVQIVDIRDGNSFTNGHIAGATNLNNENLAQFISQADMDSP CCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCC LVVVCYHGMSSQNAAQYLCEQGFDDVYSLDGGYSAWHEANA EEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]