| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is aaeB [H]
Identifier: 160877523
GI number: 160877523
Start: 5224046
End: 5226118
Strand: Direct
Name: aaeB [H]
Synonym: Sbal195_4422
Alternate gene names: 160877523
Gene position: 5224046-5226118 (Clockwise)
Preceding gene: 160877522
Following gene: 160877524
Centisome position: 97.7
GC content: 50.8
Gene sequence:
>2073_bases ATGACGCTGTTACTGAAGAGTTTATTCTTTCCAGACCGACGAACCCTCATCTTCGCGATTAAGGGCGTGATCTCGATGGC GCTCGCCTTATATGTGGCCATGTTCTTAAATCTAGAACGGCCATATTGGGCGCTGGTGTCGGCGGTATTCCTGCAAATCC GCCCCGAAAGTGGACTCGTGATCGAAAAGGGCTTATGCCAAATCGGCGGCACCTTAGTCGGCGCGCTCGCGGGGATTGCC ATACTCAACTGGTTTACGCCCTATCCCGAACTCGCCTTAGGATTACTCGCCTGCTGGATAGGGCTAAATTCTGGGTTGTC GGCCATGGTACGCCAGCAAAACTTTGTCTATGCCTTTGCTATGGCGGGCATGACCGCCTGCTTGATAGTGCTCATTGTGA TGGCAAGCCCGAGCACGGCCGATAGCGCAAAAATATTCGATGTGGCGCAGTCGAGGATCAGCGAGATTGTTGTTGGGGCG ATATGCGCCGTCTTGGTCAGCTCGCTACTTTGGCCGACCAAGGTAAAACATAGTCTGCAACTGCATGCTAAAAACACAAT TAATCATACGCTTAACTATCTTGCATTAGAACTCGATTTACAGGGGGAACATGCGAGTCGCCATGAACATATCGACACGA TTATGGAGTCAGTATCGGCGCTGAGTGACGATTCCAGTGCGGTGATTTATGAAGGCCCCGAAGGACGCGGGCAGAGCCAT GCGGCGAACTTTCTCTGCAATAAAACCCTTTCGCTATTGGCGGCAATCCAAATATTTGGCCGGCTGCAACGCAATCATTC CCATCTTGTTAGCGAACCACTCGCGAAATCCTTAGCCAATATGCGCAGTAGTTTTACCTTGATGGCGCAATCGAGTGATT ACCAAGAATGCTACAAAATGGCGCGCACCTTGAGGTATCAACTCCAACAAAACCTGATGCAATACCGCGACCGCGCGCCG CTAGAGACACGCTTACTCAAAGTTGCGATGGAATTAAGCGCCGATCTGATCATGGTGCTCAAGAGTTATAACGTGCTAAC CAGTCATTCTGCGGTACAGCTCAGCGCGCCGCCGATGGAGTTTCACCGAGACCCATTAATAGGCGTTACCACGGGCCTGC GCAGCATGGCGGTGTTTGTCATTGGGGCTTCACTGTGGATTGGCACAGGGTCGAGCGCGGTCCTCATGATGATCCTGCTG CCCGTGGTCTTTTCCATCATGATGGCGCGCCAGCCATTACCGATGTTAACCACGATTTTGCGCCGCATTCTTGTCGGCAT CACTATCGCTGTGCCCCTCACAGTGTTTTACGCTTTACCTTTACTAGCACAGAGTAGCGGCGATTTTGAAATCCTCGTTT TAGTGCTCGCTGGGCCGTTTTTTATTGGCCTACTCGCCTTGGCGAATCGACCAACCTTGCCCTATGGGCTCGGCATTTGC GTGCCGTTTGCTGTGTTAGTGCAGCCCAGCAACACCATTTCATTTGCGATAGAAAACACCGTCAGCAATGCCTTAGCGAT TTTTGTTGGCGTTACTGTACTGTATTGGTTGTTTAAATTGATTACCGAACCCAGCCAGCGGTTGATGCAATATCGTCTAC TGCAATCCATCCAAAAAGATCTGGTGCATATCGCGCAGCATGATGATCCTGAGCCTTGGTTTAACGCCCGCATGGGCGAT CGACTGCTGCGGATCGCCAGTTACGAAAAAGGCTCGGGCAAGAGTTCGAGGGTATTTACCGATCTGGTGTTTACGGCACT TAATCTAGGCCATGTGTCGATTCGGATGCGGCGCATGTTGCAGGGCATTTCAGATACGCACTTAAACTTAGGCTTAGAAA ATGCACTCAACCTCTGGCAACACAATTTAGGTCAGGCATTTATCGCCTGCGCCCACGGACAAGTCGCAGAAGAGTTTAAA ATCAGCAACGAGGCCTTATTACAAGCGCTGGCCCAATGTCCGTTACCCCACGAACAATTCACTATGATTACTGGGATGTT TGAACGCATCACTTTAACCTTCGAACGCACAGCCCACAGTATCGCCGAGCAGAAAAACACCTCAGAAAAATAG
Upstream 100 bases:
>100_bases GTATTCCGGTCGATATTGAGCTAGATAGCATTCCTAAGGACATAGAGCTGAGCGTCGGCATGACAGTTTCCATCCAGCTA CAGACTGACAAATAGTCATT
Downstream 100 bases:
>100_bases TCAGTTCTCAAACTATTTTCCACCCCAAAAGCCACTCTTTTACTGCCACCAAAACCATTTAAATCTAATAGAAGCTTGAT ATTTGGCCGATAAAATGCCT
Product: fusaric acid resistance protein region
Products: NA
Alternate protein names: pHBA efflux pump protein B [H]
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MTLLLKSLFFPDRRTLIFAIKGVISMALALYVAMFLNLERPYWALVSAVFLQIRPESGLVIEKGLCQIGGTLVGALAGIA ILNWFTPYPELALGLLACWIGLNSGLSAMVRQQNFVYAFAMAGMTACLIVLIVMASPSTADSAKIFDVAQSRISEIVVGA ICAVLVSSLLWPTKVKHSLQLHAKNTINHTLNYLALELDLQGEHASRHEHIDTIMESVSALSDDSSAVIYEGPEGRGQSH AANFLCNKTLSLLAAIQIFGRLQRNHSHLVSEPLAKSLANMRSSFTLMAQSSDYQECYKMARTLRYQLQQNLMQYRDRAP LETRLLKVAMELSADLIMVLKSYNVLTSHSAVQLSAPPMEFHRDPLIGVTTGLRSMAVFVIGASLWIGTGSSAVLMMILL PVVFSIMMARQPLPMLTTILRRILVGITIAVPLTVFYALPLLAQSSGDFEILVLVLAGPFFIGLLALANRPTLPYGLGIC VPFAVLVQPSNTISFAIENTVSNALAIFVGVTVLYWLFKLITEPSQRLMQYRLLQSIQKDLVHIAQHDDPEPWFNARMGD RLLRIASYEKGSGKSSRVFTDLVFTALNLGHVSIRMRRMLQGISDTHLNLGLENALNLWQHNLGQAFIACAHGQVAEEFK ISNEALLQALAQCPLPHEQFTMITGMFERITLTFERTAHSIAEQKNTSEK
Sequences:
>Translated_690_residues MTLLLKSLFFPDRRTLIFAIKGVISMALALYVAMFLNLERPYWALVSAVFLQIRPESGLVIEKGLCQIGGTLVGALAGIA ILNWFTPYPELALGLLACWIGLNSGLSAMVRQQNFVYAFAMAGMTACLIVLIVMASPSTADSAKIFDVAQSRISEIVVGA ICAVLVSSLLWPTKVKHSLQLHAKNTINHTLNYLALELDLQGEHASRHEHIDTIMESVSALSDDSSAVIYEGPEGRGQSH AANFLCNKTLSLLAAIQIFGRLQRNHSHLVSEPLAKSLANMRSSFTLMAQSSDYQECYKMARTLRYQLQQNLMQYRDRAP LETRLLKVAMELSADLIMVLKSYNVLTSHSAVQLSAPPMEFHRDPLIGVTTGLRSMAVFVIGASLWIGTGSSAVLMMILL PVVFSIMMARQPLPMLTTILRRILVGITIAVPLTVFYALPLLAQSSGDFEILVLVLAGPFFIGLLALANRPTLPYGLGIC VPFAVLVQPSNTISFAIENTVSNALAIFVGVTVLYWLFKLITEPSQRLMQYRLLQSIQKDLVHIAQHDDPEPWFNARMGD RLLRIASYEKGSGKSSRVFTDLVFTALNLGHVSIRMRRMLQGISDTHLNLGLENALNLWQHNLGQAFIACAHGQVAEEFK ISNEALLQALAQCPLPHEQFTMITGMFERITLTFERTAHSIAEQKNTSEK >Mature_689_residues TLLLKSLFFPDRRTLIFAIKGVISMALALYVAMFLNLERPYWALVSAVFLQIRPESGLVIEKGLCQIGGTLVGALAGIAI LNWFTPYPELALGLLACWIGLNSGLSAMVRQQNFVYAFAMAGMTACLIVLIVMASPSTADSAKIFDVAQSRISEIVVGAI CAVLVSSLLWPTKVKHSLQLHAKNTINHTLNYLALELDLQGEHASRHEHIDTIMESVSALSDDSSAVIYEGPEGRGQSHA ANFLCNKTLSLLAAIQIFGRLQRNHSHLVSEPLAKSLANMRSSFTLMAQSSDYQECYKMARTLRYQLQQNLMQYRDRAPL ETRLLKVAMELSADLIMVLKSYNVLTSHSAVQLSAPPMEFHRDPLIGVTTGLRSMAVFVIGASLWIGTGSSAVLMMILLP VVFSIMMARQPLPMLTTILRRILVGITIAVPLTVFYALPLLAQSSGDFEILVLVLAGPFFIGLLALANRPTLPYGLGICV PFAVLVQPSNTISFAIENTVSNALAIFVGVTVLYWLFKLITEPSQRLMQYRLLQSIQKDLVHIAQHDDPEPWFNARMGDR LLRIASYEKGSGKSSRVFTDLVFTALNLGHVSIRMRRMLQGISDTHLNLGLENALNLWQHNLGQAFIACAHGQVAEEFKI SNEALLQALAQCPLPHEQFTMITGMFERITLTFERTAHSIAEQKNTSEK
Specific function: Efflux pump whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell [H]
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family [H]
Homologues:
Organism=Escherichia coli, GI1789636, Length=530, Percent_Identity=22.6415094339623, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI1787933, Length=533, Percent_Identity=23.2645403377111, Blast_Score=84, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 76171; Mature: 76039
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLLKSLFFPDRRTLIFAIKGVISMALALYVAMFLNLERPYWALVSAVFLQIRPESGLV CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCE IEKGLCQIGGTLVGALAGIAILNWFTPYPELALGLLACWIGLNSGLSAMVRQQNFVYAFA ECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH MAGMTACLIVLIVMASPSTADSAKIFDVAQSRISEIVVGAICAVLVSSLLWPTKVKHSLQ HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LHAKNTINHTLNYLALELDLQGEHASRHEHIDTIMESVSALSDDSSAVIYEGPEGRGQSH HHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH AANFLCNKTLSLLAAIQIFGRLQRNHSHLVSEPLAKSLANMRSSFTLMAQSSDYQECYKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH ARTLRYQLQQNLMQYRDRAPLETRLLKVAMELSADLIMVLKSYNVLTSHSAVQLSAPPME HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEECCCCHH FHRDPLIGVTTGLRSMAVFVIGASLWIGTGSSAVLMMILLPVVFSIMMARQPLPMLTTIL HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RRILVGITIAVPLTVFYALPLLAQSSGDFEILVLVLAGPFFIGLLALANRPTLPYGLGIC HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VPFAVLVQPSNTISFAIENTVSNALAIFVGVTVLYWLFKLITEPSQRLMQYRLLQSIQKD HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LVHIAQHDDPEPWFNARMGDRLLRIASYEKGSGKSSRVFTDLVFTALNLGHVSIRMRRML HHHHHCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH QGISDTHLNLGLENALNLWQHNLGQAFIACAHGQVAEEFKISNEALLQALAQCPLPHEQF CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCHHHH TMITGMFERITLTFERTAHSIAEQKNTSEK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLLLKSLFFPDRRTLIFAIKGVISMALALYVAMFLNLERPYWALVSAVFLQIRPESGLV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCE IEKGLCQIGGTLVGALAGIAILNWFTPYPELALGLLACWIGLNSGLSAMVRQQNFVYAFA ECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHH MAGMTACLIVLIVMASPSTADSAKIFDVAQSRISEIVVGAICAVLVSSLLWPTKVKHSLQ HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH LHAKNTINHTLNYLALELDLQGEHASRHEHIDTIMESVSALSDDSSAVIYEGPEGRGQSH HHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH AANFLCNKTLSLLAAIQIFGRLQRNHSHLVSEPLAKSLANMRSSFTLMAQSSDYQECYKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHH ARTLRYQLQQNLMQYRDRAPLETRLLKVAMELSADLIMVLKSYNVLTSHSAVQLSAPPME HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEECCCCHH FHRDPLIGVTTGLRSMAVFVIGASLWIGTGSSAVLMMILLPVVFSIMMARQPLPMLTTIL HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RRILVGITIAVPLTVFYALPLLAQSSGDFEILVLVLAGPFFIGLLALANRPTLPYGLGIC HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH VPFAVLVQPSNTISFAIENTVSNALAIFVGVTVLYWLFKLITEPSQRLMQYRLLQSIQKD HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LVHIAQHDDPEPWFNARMGDRLLRIASYEKGSGKSSRVFTDLVFTALNLGHVSIRMRRML HHHHHCCCCCCCHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH QGISDTHLNLGLENALNLWQHNLGQAFIACAHGQVAEEFKISNEALLQALAQCPLPHEQF CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCCHHHH TMITGMFERITLTFERTAHSIAEQKNTSEK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA