| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pgk [H]
Identifier: 160876763
GI number: 160876763
Start: 4314632
End: 4315807
Strand: Reverse
Name: pgk [H]
Synonym: Sbal195_3657
Alternate gene names: 160876763
Gene position: 4315807-4314632 (Counterclockwise)
Preceding gene: 160876764
Following gene: 160876762
Centisome position: 80.71
GC content: 51.02
Gene sequence:
>1176_bases ATGGCAATTATCAATATGTCAGATTTGGATCTACAAGGTAAGCGTGTGCTTATCCGCGAAGATCTCAATGTGCCTGTCAG CAACGGCGTCGTCACCAGTGATGCACGTCTGCGCGCCTCTCTCCCAACTATCGAGTTGGCCCTTGCTAAAGGCGCCGCTG TGATGGTGATGTCGCACTTAGGTCGTCCGACCGAAGGTGAATACAATCCCGAATATTCTATGCAACCAGTGGTCGACTAC TTGGCTAAAGCCTTGTCGTGTCCGGTGCGTTTAGCGACCGACTATTTAGACGGCGTCGACGTTGCAGTGGGTGAAGTCGT GGTATTCGAAAACGTGCGTTTTAACGTGGGCGAAGGTAAGAACAACGAAGCGCTGTCGCAAAAAATGGCTGCACTGTGTG ATGTCTATGTTATGGACGCCTTTGGTACAGCACATCGCGCCCAAGCATCGACCCATGGCGTGGGCATGTTTGCCCCCATC GCCTGTGCTGGCCCATTACTGGCGCAAGAATTAGATGCTTTAGGCAAGGCATTAGATAATCCTGCGCGTCCTATGGTGGC GATTGTCGGTGGCTCTAAAGTGTCGACTAAGCTGACCGTGCTAGAAAGCCTTTCTGGTATCGTTGATCAGCTAGTGGTTG GCGGCGGTATTGCCAATACTTTCATCGCGGCGGCGGGCTACAATGTCGGTAAATCGCTGTATGAAGCGGATTTGATCGAC GAAGCTAAACGTTTAGTCGCTAATGCGAAAAGCCGCGGCGCCGATATTCCTGTGCCGACTGATGTAGTAGTGGCAGGCGA GTTTAGCCCAACGGCAGCGGCAACCTTAAAATCAGTTAGCGAAGTCGCTGATGGCGAAATGATTTTTGATATTGGCCCTG ATAGCGCTGAAGCACTGGCTAAAATCATCGAATCTGCTGGCACTATAGTATGGAACGGCCCTGTGGGCGTGTTCGAATTC GACCAATTTGGTGAAGGTACTAAGCGTATTGCTCAGGCGATTGCCGATTCAAAAGCTTTCTCTATAGCAGGCGGTGGTGA CACTTTGGCTGCGGTTGATAAGTATGGTATTGCCGATAAAGTGTCTTACATTTCTACTGGCGGCGGCGCTTTCCTCGAGT TCCTCGAAGGTAAAGAATTACCGGCTGTGGCTATGTTAGAAAAGCGCGGCGCTTAA
Upstream 100 bases:
>100_bases TATGCCAATTCGACGGGATGTCGAGCGCCTAGCGGCAGTAAACTGATACCGGCCATGTGTGAAACCAGTTTGTTTTTTGA TTATAAAAGGAAGCGTTACT
Downstream 100 bases:
>100_bases TTATTAAGTTTTAAAATACGCGGCGCATAAGACGCCGCGATAAGCTCTGATAACATCAAAGCTTGATAATAAATAGAAGA ATTATAAAAAAACCGCCCGT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MAIINMSDLDLQGKRVLIREDLNVPVSNGVVTSDARLRASLPTIELALAKGAAVMVMSHLGRPTEGEYNPEYSMQPVVDY LAKALSCPVRLATDYLDGVDVAVGEVVVFENVRFNVGEGKNNEALSQKMAALCDVYVMDAFGTAHRAQASTHGVGMFAPI ACAGPLLAQELDALGKALDNPARPMVAIVGGSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLID EAKRLVANAKSRGADIPVPTDVVVAGEFSPTAAATLKSVSEVADGEMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEF DQFGEGTKRIAQAIADSKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLEKRGA
Sequences:
>Translated_391_residues MAIINMSDLDLQGKRVLIREDLNVPVSNGVVTSDARLRASLPTIELALAKGAAVMVMSHLGRPTEGEYNPEYSMQPVVDY LAKALSCPVRLATDYLDGVDVAVGEVVVFENVRFNVGEGKNNEALSQKMAALCDVYVMDAFGTAHRAQASTHGVGMFAPI ACAGPLLAQELDALGKALDNPARPMVAIVGGSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLID EAKRLVANAKSRGADIPVPTDVVVAGEFSPTAAATLKSVSEVADGEMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEF DQFGEGTKRIAQAIADSKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLEKRGA >Mature_390_residues AIINMSDLDLQGKRVLIREDLNVPVSNGVVTSDARLRASLPTIELALAKGAAVMVMSHLGRPTEGEYNPEYSMQPVVDYL AKALSCPVRLATDYLDGVDVAVGEVVVFENVRFNVGEGKNNEALSQKMAALCDVYVMDAFGTAHRAQASTHGVGMFAPIA CAGPLLAQELDALGKALDNPARPMVAIVGGSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLIDE AKRLVANAKSRGADIPVPTDVVVAGEFSPTAAATLKSVSEVADGEMIFDIGPDSAEALAKIIESAGTIVWNGPVGVFEFD QFGEGTKRIAQAIADSKAFSIAGGGDTLAAVDKYGIADKVSYISTGGGAFLEFLEGKELPAVAMLEKRGA
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI31543397, Length=411, Percent_Identity=39.9026763990268, Blast_Score=269, Evalue=4e-72, Organism=Homo sapiens, GI4505763, Length=411, Percent_Identity=38.6861313868613, Blast_Score=266, Evalue=3e-71, Organism=Escherichia coli, GI1789294, Length=389, Percent_Identity=74.293059125964, Blast_Score=576, Evalue=1e-166, Organism=Caenorhabditis elegans, GI17508823, Length=408, Percent_Identity=42.6470588235294, Blast_Score=295, Evalue=4e-80, Organism=Saccharomyces cerevisiae, GI6319857, Length=414, Percent_Identity=40.5797101449275, Blast_Score=279, Evalue=5e-76, Organism=Drosophila melanogaster, GI17136394, Length=410, Percent_Identity=41.219512195122, Blast_Score=265, Evalue=4e-71, Organism=Drosophila melanogaster, GI24581203, Length=411, Percent_Identity=36.9829683698297, Blast_Score=246, Evalue=1e-65,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 40612; Mature: 40481
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIINMSDLDLQGKRVLIREDLNVPVSNGVVTSDARLRASLPTIELALAKGAAVMVMSHL CEEECCCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEECCCEEEEHHHCCHHHHHHHHC GRPTEGEYNPEYSMQPVVDYLAKALSCPVRLATDYLDGVDVAVGEVVVFENVRFNVGEGK CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCEEEEECEEEECCCCC NNEALSQKMAALCDVYVMDAFGTAHRAQASTHGVGMFAPIACAGPLLAQELDALGKALDN CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCC PARPMVAIVGGSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLID CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHH EAKRLVANAKSRGADIPVPTDVVVAGEFSPTAAATLKSVSEVADGEMIFDIGPDSAEALA HHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHH KIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIADSKAFSIAGGGDTLAAVDKYGIADK HHHHHCCCEEECCCCCEEECHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCHHH VSYISTGGGAFLEFLEGKELPAVAMLEKRGA HHHEECCCHHHHHHHCCCCCCHHHHHHHCCC >Mature Secondary Structure AIINMSDLDLQGKRVLIREDLNVPVSNGVVTSDARLRASLPTIELALAKGAAVMVMSHL EEECCCCCCCCCCEEEEEECCCCCCCCCEEECCCCEEECCCEEEEHHHCCHHHHHHHHC GRPTEGEYNPEYSMQPVVDYLAKALSCPVRLATDYLDGVDVAVGEVVVFENVRFNVGEGK CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCEEEEECEEEECCCCC NNEALSQKMAALCDVYVMDAFGTAHRAQASTHGVGMFAPIACAGPLLAQELDALGKALDN CHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCC PARPMVAIVGGSKVSTKLTVLESLSGIVDQLVVGGGIANTFIAAAGYNVGKSLYEADLID CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHH EAKRLVANAKSRGADIPVPTDVVVAGEFSPTAAATLKSVSEVADGEMIFDIGPDSAEALA HHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHH KIIESAGTIVWNGPVGVFEFDQFGEGTKRIAQAIADSKAFSIAGGGDTLAAVDKYGIADK HHHHHCCCEEECCCCCEEECHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCHHH VSYISTGGGAFLEFLEGKELPAVAMLEKRGA HHHEECCCHHHHHHHCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA