| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160876757
Identifier: 160876757
GI number: 160876757
Start: 4307715
End: 4309118
Strand: Reverse
Name: 160876757
Synonym: Sbal195_3651
Alternate gene names: NA
Gene position: 4309118-4307715 (Counterclockwise)
Preceding gene: 160876758
Following gene: 160876750
Centisome position: 80.59
GC content: 47.01
Gene sequence:
>1404_bases GTGTCTAAGATACGTGTAAAGCAAGAAGAATCCCTGTCGATTAAGTTCAGCCACCAGATGGAAAAGGGCGATAATCGTCA GCTCGATCTCTATTTCTTTTTACCAAAGGAAATGGGCATAGGCTCGCACACGCTCAATGAAGAAGAGTACTACTACAGCT CGATTGTCGGCCGTCGCTCTTACTATTCAGAAGGCTTGCACTTACCTTTGGTACAGGGCCGCTTTGCTAGTTTAAATCGC CGCACCGTTGAAGAATTCAGATTGTACTTGAATCTGTTCGCCTATCAGTTTGCCGTTGCAGTCGAAAACGACGTTAAAGA ACTCAATCAAATCACAGATGTAACCCATTTTTATTTTGCCCTCGACGAATTACGCGAACAAGTTGGCCAACTGCTGAAAA AGTTTCGCCGTAACGAACCGGGCGATCCTAAATGGAAATCCTACTTCGAAAATGCCGACAACTACCTGTCTTGGTTCTGC GAGCAGCAGTTACTAAAAGTGCTCGCCCATGCTACACGTACCAGTGATTTCAACGATATCCAAGAACGGGTGCTAACACT GTGTCGCAATGAGTGCGCCTATCGGGATGAGCATAACTACAACTCGGCGCAAACTAAGCAAGATCCTAACCGTATCTCAA ACAAGATGTTGTTGTTACGACGTTTAATCCAACAAGGTGTGGTACTCAAAGAAGAGTTAAAGCCCTTAGGAATTGGCCTT AAAAAGTTCACGACGGGACTGGCGACGGCGTTAGTGATGTTGGTGGTGTCGGCGTTGATTATTCAAGCGCAGGGCGCCTT CAGCGGCTTTACCATTGCCTTAGTGCTGACCTTGGCGGTGATTTACGGCTTCAGGGAAATCTTTAAGGATGACGTGCGTA ATGCCATGTGGCGTTTTATTCAGCGGGGCAGGCCACGCTGGAGCCGGATTTTGCGTGATACCACTAGTCAGGCGGTGATT GCTAAGCAGTTAGTATGGCTTGAGTTTATGCGCCAGCAAGATCTGCCCGATAAAGTCAGCGAAATTTTAAAGCACAGGCA TAGCCAAAATAAGGTCGATGCGGAAATCCTGCACTATAAAATTGCCACTAAGGTGAATCAGAGCGAGTTCCAAGCGGGAT ACTCCACAATTCAAGAGCAAGTGAACTTTAGCTTAGTGCCCTTTGCCCGCTACTTAGAGCGGGGTAAGGCGAAGATTTAT AAGGAAGTTGAAGGCAAAATCAGCCATGAATCGGTTGAGCGACGCTATCAAGTTAACTTGATTTTAGTGCTGCGCGATGG TCGCGAGGCCCCGCAGTATATTCGCTACAAAATCACCATGAACCGCTCGACGATTATTGAGATTACCCAGAGCCAATTGC CCGATTCGGTCAACATGCCCGAATCTACGATTGATGACGAGTAA
Upstream 100 bases:
>100_bases AATTTAATCAGTGAATTTGAGTTTATTTCAGTTAAGATTAGTGCTCATTGATTTATGTCTACTGCGATGAGTCTCTGTGA GGGCTCATGAAAAGGGTGTT
Downstream 100 bases:
>100_bases AGGCCTGACCGATATTTTGATCGTTATTCTGTTTCGCCCGTTTTAGGGCGACTTCGGCATTATTCAGATACTGCTCAAGT GTCTGGCCTTCTTGATAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSSIVGRRSYYSEGLHLPLVQGRFASLNR RTVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFALDELREQVGQLLKKFRRNEPGDPKWKSYFENADNYLSWFC EQQLLKVLAHATRTSDFNDIQERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGL KKFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFIQRGRPRWSRILRDTTSQAVI AKQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYKIATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIY KEVEGKISHESVERRYQVNLILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE
Sequences:
>Translated_467_residues MSKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSSIVGRRSYYSEGLHLPLVQGRFASLNR RTVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFALDELREQVGQLLKKFRRNEPGDPKWKSYFENADNYLSWFC EQQLLKVLAHATRTSDFNDIQERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGL KKFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFIQRGRPRWSRILRDTTSQAVI AKQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYKIATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIY KEVEGKISHESVERRYQVNLILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE >Mature_466_residues SKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSSIVGRRSYYSEGLHLPLVQGRFASLNRR TVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFALDELREQVGQLLKKFRRNEPGDPKWKSYFENADNYLSWFCE QQLLKVLAHATRTSDFNDIQERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGLK KFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFIQRGRPRWSRILRDTTSQAVIA KQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYKIATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIYK EVEGKISHESVERRYQVNLILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54655; Mature: 54524
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSSIVGRRS CCCCCCCCCCCCEEEEEHHHCCCCCCEEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHH YYSEGLHLPLVQGRFASLNRRTVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDELREQVGQLLKKFRRNEPGDPKWKSYFENADNYLSWFCEQQLLKVLAHATRTSDFNDI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGL HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH KKFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRGRPRWSRILRDTTSQAVIAKQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH IATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIYKEVEGKISHESVERRYQVNL HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEE ILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE EEEEECCCCCCCEEEEEEEECCCHHEEEHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SKIRVKQEESLSIKFSHQMEKGDNRQLDLYFFLPKEMGIGSHTLNEEEYYYSSIVGRRS CCCCCCCCCCCEEEEEHHHCCCCCCEEEEEEEECHHCCCCCCCCCCHHHHHHHHHHHHH YYSEGLHLPLVQGRFASLNRRTVEEFRLYLNLFAYQFAVAVENDVKELNQITDVTHFYFA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDELREQVGQLLKKFRRNEPGDPKWKSYFENADNYLSWFCEQQLLKVLAHATRTSDFNDI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH QERVLTLCRNECAYRDEHNYNSAQTKQDPNRISNKMLLLRRLIQQGVVLKEELKPLGIGL HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCH KKFTTGLATALVMLVVSALIIQAQGAFSGFTIALVLTLAVIYGFREIFKDDVRNAMWRFI HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRGRPRWSRILRDTTSQAVIAKQLVWLEFMRQQDLPDKVSEILKHRHSQNKVDAEILHYK HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH IATKVNQSEFQAGYSTIQEQVNFSLVPFARYLERGKAKIYKEVEGKISHESVERRYQVNL HHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEE ILVLRDGREAPQYIRYKITMNRSTIIEITQSQLPDSVNMPESTIDDE EEEEECCCCCCCEEEEEEEECCCHHEEEHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA