| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160876758
Identifier: 160876758
GI number: 160876758
Start: 4309212
End: 4309766
Strand: Reverse
Name: 160876758
Synonym: Sbal195_3652
Alternate gene names: NA
Gene position: 4309766-4309212 (Counterclockwise)
Preceding gene: 160876759
Following gene: 160876757
Centisome position: 80.6
GC content: 44.5
Gene sequence:
>555_bases GTGGCTAAATGGCTCAAGTGGACCATCAATATTGTTATTTTGTCGGCCTTGATTGCGGCTTGCGGGGTAATTTATAAACA GTCGGCAACGAGCCGGACCATGATGTTGAGTTGCAGTTCAGAACTGTTTGATCGCCACTCGAGTGCGAATCCCAGTATCA GTGCCAGTGCTGGCAGTGACAATAAATTTTACCTGCTTGTGGACGTATTGATTGCCGCCGACAAAGCGCAAATTAACTAC CGTTACTTTAATTTTGATGGCACCAGTGCGGGCCATATTTCGATGCGTGGCAAGGTCGACAGTATTGAGGCCAATAGCAT GACCTATAGGGTGGCGGTGGAGACGAAAACTGAATCGGAAATGGAAAAGCAAAAAAATTGGCCAGAACATATGAAATACC TCTCTAACATCAGCAGTTTACCGTTTCGCGATTCTGGGGTGAATAATTTCAGTATTGAAGTGTTGGATATGGATGACACT AAGGATTATGCCGTGGTGTTATTCCAACCCAGCAATACGATTTGTGGATGCCGAATCGTAAATAGTCGAATTTAA
Upstream 100 bases:
>100_bases GAAAAACTCGGCCAGTCAGTGCTGCGCAATATTAGTATCAGCGATTTTTCTCGCCCCAAAGCATTCATCGACTCAGCCTG GCTACGCGAGGTGGATATCT
Downstream 100 bases:
>100_bases TCAGTGAATTTGAGTTTATTTCAGTTAAGATTAGTGCTCATTGATTTATGTCTACTGCGATGAGTCTCTGTGAGGGCTCA TGAAAAGGGTGTTGTGTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAKWLKWTINIVILSALIAACGVIYKQSATSRTMMLSCSSELFDRHSSANPSISASAGSDNKFYLLVDVLIAADKAQINY RYFNFDGTSAGHISMRGKVDSIEANSMTYRVAVETKTESEMEKQKNWPEHMKYLSNISSLPFRDSGVNNFSIEVLDMDDT KDYAVVLFQPSNTICGCRIVNSRI
Sequences:
>Translated_184_residues MAKWLKWTINIVILSALIAACGVIYKQSATSRTMMLSCSSELFDRHSSANPSISASAGSDNKFYLLVDVLIAADKAQINY RYFNFDGTSAGHISMRGKVDSIEANSMTYRVAVETKTESEMEKQKNWPEHMKYLSNISSLPFRDSGVNNFSIEVLDMDDT KDYAVVLFQPSNTICGCRIVNSRI >Mature_183_residues AKWLKWTINIVILSALIAACGVIYKQSATSRTMMLSCSSELFDRHSSANPSISASAGSDNKFYLLVDVLIAADKAQINYR YFNFDGTSAGHISMRGKVDSIEANSMTYRVAVETKTESEMEKQKNWPEHMKYLSNISSLPFRDSGVNNFSIEVLDMDDTK DYAVVLFQPSNTICGCRIVNSRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20562; Mature: 20430
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKWLKWTINIVILSALIAACGVIYKQSATSRTMMLSCSSELFDRHSSANPSISASAGSD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCCCCEEECCCCC NKFYLLVDVLIAADKAQINYRYFNFDGTSAGHISMRGKVDSIEANSMTYRVAVETKTESE CEEEEEEEEEECCCCEEEEEEEEECCCCCCCEEEECCCCCCEECCCEEEEEEEECCCHHH MEKQKNWPEHMKYLSNISSLPFRDSGVNNFSIEVLDMDDTKDYAVVLFQPSNTICGCRIV HHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEEE NSRI CCCC >Mature Secondary Structure AKWLKWTINIVILSALIAACGVIYKQSATSRTMMLSCSSELFDRHSSANPSISASAGSD CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHCCCCCCCCEEECCCCC NKFYLLVDVLIAADKAQINYRYFNFDGTSAGHISMRGKVDSIEANSMTYRVAVETKTESE CEEEEEEEEEECCCCEEEEEEEEECCCCCCCEEEECCCCCCEECCCEEEEEEEECCCHHH MEKQKNWPEHMKYLSNISSLPFRDSGVNNFSIEVLDMDDTKDYAVVLFQPSNTICGCRIV HHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEEE NSRI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA