| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is ubiG
Identifier: 160875517
GI number: 160875517
Start: 2839872
End: 2840582
Strand: Direct
Name: ubiG
Synonym: Sbal195_2405
Alternate gene names: 160875517
Gene position: 2839872-2840582 (Clockwise)
Preceding gene: 160875513
Following gene: 160875518
Centisome position: 53.11
GC content: 47.26
Gene sequence:
>711_bases ATGCATCAGAATACCAATGTGGACCCACAGGAAATCGCAAAGTTTGAACGTATGGCCGAAACGTGGTGGGATCTCAACGG TGAATTTAAGCCGCTGCATCTATTAAACCCGCTGCGCTTAAATTATATCGATCAAACTGCTGGCGGTATTTTCGGTAAGA AAGTGCTCGACGTTGGTTGCGGCGGCGGGATTTTATCTGAAAGCATGGCCCGCATAGGTGCCGAGGTTGATGGTCTTGAC ATGGGTGATGAGCCCTTAGAAGTCGCGCGCCTGCATGCCCTCGAAACGGGCGTAAGCATTAATTATGTAAAAAATACTGC CGAGACCCACAGCCAAGATCATCAAGCCTATTACGATGTGGTGACCTGTATGGAAATGCTGGAGCATGTGCCCGATCCAC AATCGGTGATCAAGGCTTGCTGTGACATGGTCAAACCCGGTGGCTTTGTGTTTTTCTCCACCATCAACCGCAACATTAAA TCCTATGTGCACACGATTCTCGGCGCAGAATATTTACTGAAGATGCTGCCGGTTGGCACCCATGAGCATAAAAAATTCAT TAAGCCTTCGGAATTGATTGAGCTTGTGGACAATACCGACCTTATCTGTACCGATGCATTAGGCATCAGCTACAACCCGC TGACGGGCATTTTTAAATACACGCCTAAAGTTGATGTCAATTACATGATCGCAACGCGTAAGGTTGATTAA
Upstream 100 bases:
>100_bases AAAATTCACTCAACCACAAGGGCTTAGCTCAGTCGAACACTTTGTTTATCAAACATAGTCGTTATAATAGCCGCACAATA CAGCTACTTCAGGTAATAGC
Downstream 100 bases:
>100_bases TATGAGTCTGGCACAGATCCAAGGCGTACTGTTCGATCTCGACGGCACCTTAGCCGATACCGCGCCGGATCTGGTGCAGG CCCTTAATTTAAGTCTTCAG
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MHQNTNVDPQEIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGKKVLDVGCGGGILSESMARIGAEVDGLD MGDEPLEVARLHALETGVSINYVKNTAETHSQDHQAYYDVVTCMEMLEHVPDPQSVIKACCDMVKPGGFVFFSTINRNIK SYVHTILGAEYLLKMLPVGTHEHKKFIKPSELIELVDNTDLICTDALGISYNPLTGIFKYTPKVDVNYMIATRKVD
Sequences:
>Translated_236_residues MHQNTNVDPQEIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGKKVLDVGCGGGILSESMARIGAEVDGLD MGDEPLEVARLHALETGVSINYVKNTAETHSQDHQAYYDVVTCMEMLEHVPDPQSVIKACCDMVKPGGFVFFSTINRNIK SYVHTILGAEYLLKMLPVGTHEHKKFIKPSELIELVDNTDLICTDALGISYNPLTGIFKYTPKVDVNYMIATRKVD >Mature_236_residues MHQNTNVDPQEIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGKKVLDVGCGGGILSESMARIGAEVDGLD MGDEPLEVARLHALETGVSINYVKNTAETHSQDHQAYYDVVTCMEMLEHVPDPQSVIKACCDMVKPGGFVFFSTINRNIK SYVHTILGAEYLLKMLPVGTHEHKKFIKPSELIELVDNTDLICTDALGISYNPLTGIFKYTPKVDVNYMIATRKVD
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=238, Percent_Identity=34.0336134453782, Blast_Score=156, Evalue=1e-38, Organism=Escherichia coli, GI1788564, Length=230, Percent_Identity=65.2173913043478, Blast_Score=323, Evalue=7e-90, Organism=Caenorhabditis elegans, GI115533050, Length=244, Percent_Identity=30.327868852459, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6324476, Length=285, Percent_Identity=30.1754385964912, Blast_Score=127, Evalue=1e-30, Organism=Drosophila melanogaster, GI281365311, Length=243, Percent_Identity=30.8641975308642, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI24585589, Length=221, Percent_Identity=33.0316742081448, Blast_Score=140, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_SHEB2 (B8EA88)
Other databases:
- EMBL: CP001252 - RefSeq: YP_002357984.1 - ProteinModelPortal: B8EA88 - SMR: B8EA88 - GeneID: 7088350 - GenomeReviews: CP001252_GR - KEGG: sbp:Sbal223_2057 - HOGENOM: HBG738842 - OMA: DHAEIAK - ProtClustDB: PRK05134 - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 26376; Mature: 26376
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQNTNVDPQEIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGKKVLDVGC CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHCHHHHHHCCHHHHHHHHCCC GGGILSESMARIGAEVDGLDMGDEPLEVARLHALETGVSINYVKNTAETHSQDHQAYYDV CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHHH VTCMEMLEHVPDPQSVIKACCDMVKPGGFVFFSTINRNIKSYVHTILGAEYLLKMLPVGT HHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC HEHKKFIKPSELIELVDNTDLICTDALGISYNPLTGIFKYTPKVDVNYMIATRKVD HHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCCEEEEEEEECC >Mature Secondary Structure MHQNTNVDPQEIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGKKVLDVGC CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHCHHHHHHCCHHHHHHHHCCC GGGILSESMARIGAEVDGLDMGDEPLEVARLHALETGVSINYVKNTAETHSQDHQAYYDV CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCHHHCCHHHHHHHHH VTCMEMLEHVPDPQSVIKACCDMVKPGGFVFFSTINRNIKSYVHTILGAEYLLKMLPVGT HHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC HEHKKFIKPSELIELVDNTDLICTDALGISYNPLTGIFKYTPKVDVNYMIATRKVD HHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA