| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874472
Identifier: 160874472
GI number: 160874472
Start: 1611530
End: 1612249
Strand: Direct
Name: 160874472
Synonym: Sbal195_1353
Alternate gene names: NA
Gene position: 1611530-1612249 (Clockwise)
Preceding gene: 160874471
Following gene: 160874473
Centisome position: 30.14
GC content: 48.89
Gene sequence:
>720_bases ATGGAAAAATTAATAATGAAATCAAAATGTTTTTATCTTGTCGCCGGCGGATTGTTATTGATGTCGACTGCGGCGAATGC CGGATTATCGGGCACTGTGACGGCGACGTCGGATTACACTTTTAACGGTGTTAGCCAAACGGACAACGGCCCAGCACTGC AAGGCAGTTTGGATTACGGTTTTGATTCGGGCTGGTACGTGGGCGGCTTTACCTCGAACGTCGACTTTGGTGGCAGCGAT GACACTTGGTTGGAGCTCGATGCCTATGCGGGGAAGTACTTTCAGCTTAACAAGCAACTGAGTCTCGATGTCGGACTGGC CTATTACACTTACCACGGCGATTCCTTCTCTGATGAGTACAACTATCCTGAGCTGTATAGCAAGCTAGGTTACGACACTT CCCTTGGCCACTCTGAAGCTAAGTTAACCTACACATGGGACTACTTTGGTTTTGGCGGCGGACATTACACTATGTTGCTC GGCCATACGATTAGCGTTGCCGAAGGCCATGATATTCGCTTCAGTGTTGACCGCTCGACGTCACTCGATGAAGACAAATG GTCATGGGATGGCGGTAAATCCTTTAATCACTATCGCGTTGCCTATATGACCAGCTGGAGCGGCTTTGATTTCAGCCTTG CTGCTGAAGATACCAGCATGAACTTAGATACCAGTGACGAGCGCCTAGTGTTGTCGGTATCGCGCCAATTCATGTTGTAA
Upstream 100 bases:
>100_bases TTGGTTACATCATGATGACGCAATTGCAAACAGTTCGTGCCATTGAGCGCTCGCCAAAAGAGAACAAAATCGACTTTACT AAAATTGAGCTAGCTAACTA
Downstream 100 bases:
>100_bases TCTAAGGGACTTTTACCATAAAAGTGCCTCCTCTTGGTGAGTTCAGTCGCGCTTTCTGGTAAGGTGCACTGGACAACTGG GACGGGACATTATGGAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MEKLIMKSKCFYLVAGGLLLMSTAANAGLSGTVTATSDYTFNGVSQTDNGPALQGSLDYGFDSGWYVGGFTSNVDFGGSD DTWLELDAYAGKYFQLNKQLSLDVGLAYYTYHGDSFSDEYNYPELYSKLGYDTSLGHSEAKLTYTWDYFGFGGGHYTMLL GHTISVAEGHDIRFSVDRSTSLDEDKWSWDGGKSFNHYRVAYMTSWSGFDFSLAAEDTSMNLDTSDERLVLSVSRQFML
Sequences:
>Translated_239_residues MEKLIMKSKCFYLVAGGLLLMSTAANAGLSGTVTATSDYTFNGVSQTDNGPALQGSLDYGFDSGWYVGGFTSNVDFGGSD DTWLELDAYAGKYFQLNKQLSLDVGLAYYTYHGDSFSDEYNYPELYSKLGYDTSLGHSEAKLTYTWDYFGFGGGHYTMLL GHTISVAEGHDIRFSVDRSTSLDEDKWSWDGGKSFNHYRVAYMTSWSGFDFSLAAEDTSMNLDTSDERLVLSVSRQFML >Mature_239_residues MEKLIMKSKCFYLVAGGLLLMSTAANAGLSGTVTATSDYTFNGVSQTDNGPALQGSLDYGFDSGWYVGGFTSNVDFGGSD DTWLELDAYAGKYFQLNKQLSLDVGLAYYTYHGDSFSDEYNYPELYSKLGYDTSLGHSEAKLTYTWDYFGFGGGHYTMLL GHTISVAEGHDIRFSVDRSTSLDEDKWSWDGGKSFNHYRVAYMTSWSGFDFSLAAEDTSMNLDTSDERLVLSVSRQFML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26519; Mature: 26519
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLIMKSKCFYLVAGGLLLMSTAANAGLSGTVTATSDYTFNGVSQTDNGPALQGSLDYG CCCCHHHCCCEEEECCCEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCEEECCCCCC FDSGWYVGGFTSNVDFGGSDDTWLELDAYAGKYFQLNKQLSLDVGLAYYTYHGDSFSDEY CCCCEEECEEECCCCCCCCCCCEEEEECCCCCEEEECCEEEEEEEEEEEEEECCCCCCCC NYPELYSKLGYDTSLGHSEAKLTYTWDYFGFGGGHYTMLLGHTISVAEGHDIRFSVDRST CCHHHHHHCCCCCCCCCCCEEEEEEEECEECCCCEEEEEEEEEEEEECCCEEEEEECCCC SLDEDKWSWDGGKSFNHYRVAYMTSWSGFDFSLAAEDTSMNLDTSDERLVLSVSRQFML CCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEHHHCC >Mature Secondary Structure MEKLIMKSKCFYLVAGGLLLMSTAANAGLSGTVTATSDYTFNGVSQTDNGPALQGSLDYG CCCCHHHCCCEEEECCCEEEEEECCCCCCCEEEEECCCEEECCCCCCCCCCEEECCCCCC FDSGWYVGGFTSNVDFGGSDDTWLELDAYAGKYFQLNKQLSLDVGLAYYTYHGDSFSDEY CCCCEEECEEECCCCCCCCCCCEEEEECCCCCEEEECCEEEEEEEEEEEEEECCCCCCCC NYPELYSKLGYDTSLGHSEAKLTYTWDYFGFGGGHYTMLLGHTISVAEGHDIRFSVDRST CCHHHHHHCCCCCCCCCCCEEEEEEEECEECCCCEEEEEEEEEEEEECCCEEEEEECCCC SLDEDKWSWDGGKSFNHYRVAYMTSWSGFDFSLAAEDTSMNLDTSDERLVLSVSRQFML CCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA