| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874473
Identifier: 160874473
GI number: 160874473
Start: 1612341
End: 1612817
Strand: Direct
Name: 160874473
Synonym: Sbal195_1354
Alternate gene names: NA
Gene position: 1612341-1612817 (Clockwise)
Preceding gene: 160874472
Following gene: 160874475
Centisome position: 30.15
GC content: 49.48
Gene sequence:
>477_bases ATGGAAAAGTACGAACAACTGCTCATTTCGCTGCGTCGAGTGATACGCGCTATCGACATTCATTCTCGCCAGCTAAACAA ACACTCAGGTTTAACTGGGCCGCAATTGATGGTGATGCAGAAAATCGCACAATTGGATGCGCCATTGGCGAAAACTGTGG CGGAAGAGATCACGCTGAGCCCTGCGACAGTGACGACCATTATCGATCGACTCGAGGGCCGTGGTTTAGTGATCCGTCTG CGCAGTGAGACTGATAAACGTAAGGTGCATTTATACCTTAGCGATGCGGGCCGAGCACTGTTACAGGACTCGCCTAAACC GCTACAGGATCATTTTATTAAGCGTTATCAGAATCTTGAAGAATGGGAACAGAGTCAATTGCTCTCTGCGGTTGAGCGTA TCGCGACTATGATGGACGCCGATAAAATTGATGCGGCGCCTATGCTCTTGGTCGGAAAGATCCAAGGCGACGAGTAA
Upstream 100 bases:
>100_bases ATGTTGTAATCTAAGGGACTTTTACCATAAAAGTGCCTCCTCTTGGTGAGTTCAGTCGCGCTTTCTGGTAAGGTGCACTG GACAACTGGGACGGGACATT
Downstream 100 bases:
>100_bases TCGTTTAGATCATGTTTTAAATGATTAGACGTTAAAATCGATTAGTTTTTAAAATGAAAAAGCACTGAAGATTCAGTGCT TTTTTGCTTTTAACTCGATG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein MarR; Transcriptional Regulator Of MarR Family Protein; Transcriptional Regulator MarR Family Protein; HTH-Type Transcriptional Regulator; MarR Family Regulatory Protein; MarR-Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family; MarR Family Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MEKYEQLLISLRRVIRAIDIHSRQLNKHSGLTGPQLMVMQKIAQLDAPLAKTVAEEITLSPATVTTIIDRLEGRGLVIRL RSETDKRKVHLYLSDAGRALLQDSPKPLQDHFIKRYQNLEEWEQSQLLSAVERIATMMDADKIDAAPMLLVGKIQGDE
Sequences:
>Translated_158_residues MEKYEQLLISLRRVIRAIDIHSRQLNKHSGLTGPQLMVMQKIAQLDAPLAKTVAEEITLSPATVTTIIDRLEGRGLVIRL RSETDKRKVHLYLSDAGRALLQDSPKPLQDHFIKRYQNLEEWEQSQLLSAVERIATMMDADKIDAAPMLLVGKIQGDE >Mature_158_residues MEKYEQLLISLRRVIRAIDIHSRQLNKHSGLTGPQLMVMQKIAQLDAPLAKTVAEEITLSPATVTTIIDRLEGRGLVIRL RSETDKRKVHLYLSDAGRALLQDSPKPLQDHFIKRYQNLEEWEQSQLLSAVERIATMMDADKIDAAPMLLVGKIQGDE
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17909; Mature: 17909
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKYEQLLISLRRVIRAIDIHSRQLNKHSGLTGPQLMVMQKIAQLDAPLAKTVAEEITLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCC PATVTTIIDRLEGRGLVIRLRSETDKRKVHLYLSDAGRALLQDSPKPLQDHFIKRYQNLE HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHCHH EWEQSQLLSAVERIATMMDADKIDAAPMLLVGKIQGDE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure MEKYEQLLISLRRVIRAIDIHSRQLNKHSGLTGPQLMVMQKIAQLDAPLAKTVAEEITLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCC PATVTTIIDRLEGRGLVIRLRSETDKRKVHLYLSDAGRALLQDSPKPLQDHFIKRYQNLE HHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHCHH EWEQSQLLSAVERIATMMDADKIDAAPMLLVGKIQGDE HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA