| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874471
Identifier: 160874471
GI number: 160874471
Start: 1610313
End: 1611530
Strand: Direct
Name: 160874471
Synonym: Sbal195_1352
Alternate gene names: NA
Gene position: 1610313-1611530 (Clockwise)
Preceding gene: 160874470
Following gene: 160874472
Centisome position: 30.11
GC content: 44.83
Gene sequence:
>1218_bases ATGACCTGGTTATTATCCGCAGGGATACTGTTTACTTTTGCCGCGATTGCGTTTGTGATTTATCGCTGGGGTAACATTCG CTGTATCGGTGTGACGCCTGTGCGTACGTTTACCTTTATCGCGATTCTGTTCACCTCAGGCCTCGATGTCGGTTTGATTA TGTTTCCGCTGACCGAGTTTGCCGGCTATGCCAATGTGGCGGCGAGTCCTGAATACGGCTTTACCAATCCGCTGGCGATT GAGTTTGGCTTTTGGGCCTTCTTGATTTGGGGTTTCTACTTTCTAACCTGTTTCTATTTTTGTGTGATTGAACCTAGGGT GAAGTTCTTCGACATTCCTTTGGTCAAGTTCATCAATAATATCGTGATTATTGGTACCTGTGCTTTTACCGCCTATTTGT TATTGAGCAATTTGCCCTGGTACTTACCCGAATTAGGTGATGGCGAAACCATAGTCGGTAGCTTTTATTTAATCGTATTT ATGGTGATCGCCGCGGCGGTGTATTCCAGCACTAGCATACGTTATGTGCGTATTTTGAGCTTAGCGAGCACTTGGTTATT TTTAGGCTTGATTGCCATTATGTGGGCCAGTGCATTTTTATCGGCTGACTCGAGTGTGGGCGAGTTCTTTACGACCTTTG CCATGTTGGGCGACTACTTCGGCAATATTCAACATTTTGTGTTACCCATCAACGACTACCATGAGTTTTATCTGTTCTGG TGGTTTGCGTGGAGCATTATGATTGGTCAATTTACCTCGCGCTTTGTCGGCGGGATGAAAACCTATCAAGTGTTGCTGGC CATGATGGTGTTTCCGTCTATCCCCATCGCTATCTGGTTCACCGTGCTTTATTACTACAGCGCCAATGGGTTAGATACCT CGGGCTTCTATAATCTGGCGATGGTGATTGTAGGGGTGACCTTTGTGATTAACTCACTCGACTCACTGGTACGCCTGTAT ACCGACAATCTTAACCTGACGATTGAGCGTTTAGGCAAGCTTAAATATGTCAGCTTTAACTTAGTGTTGCTCTGCAGTCT GACATTACTCTTTCAATTAGACTTTCTTCAAATTCAATGGGTTGGTGCAATCGCACTGGGCCTGATCTTCAGCTGTTTTG GTTACATCATGATGACGCAATTGCAAACAGTTCGTGCCATTGAGCGCTCGCCAAAAGAGAACAAAATCGACTTTACTAAA ATTGAGCTAGCTAACTAA
Upstream 100 bases:
>100_bases TCAGTTTTTTATTATTAAATAAAAACATGGAGTTACATTTTATGGATTCATATCCTCATGCCTACTTATATCCAGTATCG ACTGGGACGGAGTGCATCCT
Downstream 100 bases:
>100_bases TGGAAAAATTAATAATGAAATCAAAATGTTTTTATCTTGTCGCCGGCGGATTGTTATTGATGTCGACTGCGGCGAATGCC GGATTATCGGGCACTGTGAC
Product: putative BCCT family protein transporter
Products: NA
Alternate protein names: QuateRNAry Ammonium Permease; BCCT Family Transporter; Choline-Glycine Betaine Transporter-Like Protein
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYANVAASPEYGFTNPLAI EFGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINNIVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVF MVIAAAVYSSTSIRYVRILSLASTWLFLGLIAIMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFW WFAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLAMVIVGVTFVINSLDSLVRLY TDNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQWVGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTK IELAN
Sequences:
>Translated_405_residues MTWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYANVAASPEYGFTNPLAI EFGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINNIVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVF MVIAAAVYSSTSIRYVRILSLASTWLFLGLIAIMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFW WFAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLAMVIVGVTFVINSLDSLVRLY TDNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQWVGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTK IELAN >Mature_404_residues TWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEFAGYANVAASPEYGFTNPLAIE FGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINNIVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVFM VIAAAVYSSTSIRYVRILSLASTWLFLGLIAIMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFWW FAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLAMVIVGVTFVINSLDSLVRLYT DNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQWVGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTKI ELAN
Specific function: Unknown
COG id: COG1292
COG function: function code M; Choline-glycine betaine transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46021; Mature: 45890
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEF CCEEHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHH AGYANVAASPEYGFTNPLAIEFGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINN CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHCC IVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVFMVIAAAVYSSTSIRYVRILS EEEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LASTWLFLGLIAIMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH WFAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHH MVIVGVTFVINSLDSLVRLYTDNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQW HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHH VGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTKIELAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC >Mature Secondary Structure TWLLSAGILFTFAAIAFVIYRWGNIRCIGVTPVRTFTFIAILFTSGLDVGLIMFPLTEF CEEHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHH AGYANVAASPEYGFTNPLAIEFGFWAFLIWGFYFLTCFYFCVIEPRVKFFDIPLVKFINN CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHCC IVIIGTCAFTAYLLLSNLPWYLPELGDGETIVGSFYLIVFMVIAAAVYSSTSIRYVRILS EEEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LASTWLFLGLIAIMWASAFLSADSSVGEFFTTFAMLGDYFGNIQHFVLPINDYHEFYLFW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH WFAWSIMIGQFTSRFVGGMKTYQVLLAMMVFPSIPIAIWFTVLYYYSANGLDTSGFYNLA HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHH MVIVGVTFVINSLDSLVRLYTDNLNLTIERLGKLKYVSFNLVLLCSLTLLFQLDFLQIQW HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHH VGAIALGLIFSCFGYIMMTQLQTVRAIERSPKENKIDFTKIELAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA