| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is macB [H]
Identifier: 160874153
GI number: 160874153
Start: 1229248
End: 1230447
Strand: Direct
Name: macB [H]
Synonym: Sbal195_1033
Alternate gene names: 160874153
Gene position: 1229248-1230447 (Clockwise)
Preceding gene: 160874152
Following gene: 160874154
Centisome position: 22.99
GC content: 46.58
Gene sequence:
>1200_bases ATGTTACATATTAAACCTATTCTCAGCAGTTTGTTGCGCAGTAAAAGCGGTCCTGTCTTACTGCTTATTCAGATTATTTT GTCTGTGGCAATTGTGGCGAACGCGAGCTTTATTATTCAGGAGCGTTTAGCCCTGATGCAGCGCGTTTCGGGAGTCGAAG AGTCTGAAGTCTTGACCTTTAGCTTGTTCAACTTCGATCCATTGATCGATAAAACCGCGCAAAACAAAATTGATCAGCAA ATTTTACGTGGGCTACCCAATGTGATTGATGCGACCTCAACCAATATGTTGCCATTAAGCGGTGGTGGCTGGTCGAGCAC CTTCAATTTGGGGCCCGATCCGGATAGCGCTAAATCGACACCGCAATTTGCCATGTACTTAGGGACAGATCACACCCTTG AGACCTTAGGCCTTAAGCTGATTGAAGGGCGTAACTTTTATCCCCATGAACTTAAGGACAATCTCGATAGCCCGAGCCGA TTAGCGATCATCTCCAGCGCGTTAGCTAAAGCGATTTGGCCTGATGAATCACCACTTGGCAAAGTGTTGTACGAGGGTAA AGATGCACAGATCACTGTGATAGGGGTTGTCGATAAACTGCAAGGCGCGTGGATTGACAGTTCTAGCCTTGAAAACAGTG TGATTCAAAATGTGGATTATGGCAGCAGTTCTTACATGGTACGGGCCAAACCTGAGTTTCACGCCGAGCTTAAAGATGCG ATAAAAAAAGCGTTGCTGGCCGAGAATCCTAACCGAGTTCTCGATGGCTTTAAGTCAATCGAGGCGTTAAAAGATAGCTC ATACCGCGATCATAAATTGATGATTACCGTGTTGATCATGATGGTAGTGTTGCTGCTGCTGATCACCTCGCTCGGTTTAA CCGGTATGGTGATGTTTAATATCCAGCGCCGCACTAAGCAGATAGGTACCCGCCGTGCACTGGGTGCGAAAAAGCGCGAC ATTGTCAGTTACTTCCTCGTAGAAAATTATTTGATTTGCTTAGCGGGAGGCGTGCTGGGTGGCTTGTTAGCGATACAGTT AGGGCAGCAGTTAATGAAAATCTATAGCTTGCCTATGTTGGACTTAAGTTATCCATTATTTACTGTGGCAGGCTTGTTTA TTGTCACCACGCTAGCGGTTTACCTACCAGCGCGTAAGGCGGCAAATATTTCGCCAGCAACGGCAACCCGCAGCGTATAG
Upstream 100 bases:
>100_bases ATTGCGGTAGGCACAGCCTTGTTGGCTGGCTTGTATCCCGCGTGGGTCGTGTGCCGGACTAAACCTAGCGTTTATCTGAA AAGCCAGTAAGGGACTTATT
Downstream 100 bases:
>100_bases CGAAATATTTGATGTCACTCAAGGTACGATAAAAGCCCAATAAAAGTGCGATAACAATAGGATGTTATTGCACTTTTTGT TACTTTACGGTTAATAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MLHIKPILSSLLRSKSGPVLLLIQIILSVAIVANASFIIQERLALMQRVSGVEESEVLTFSLFNFDPLIDKTAQNKIDQQ ILRGLPNVIDATSTNMLPLSGGGWSSTFNLGPDPDSAKSTPQFAMYLGTDHTLETLGLKLIEGRNFYPHELKDNLDSPSR LAIISSALAKAIWPDESPLGKVLYEGKDAQITVIGVVDKLQGAWIDSSSLENSVIQNVDYGSSSYMVRAKPEFHAELKDA IKKALLAENPNRVLDGFKSIEALKDSSYRDHKLMITVLIMMVVLLLLITSLGLTGMVMFNIQRRTKQIGTRRALGAKKRD IVSYFLVENYLICLAGGVLGGLLAIQLGQQLMKIYSLPMLDLSYPLFTVAGLFIVTTLAVYLPARKAANISPATATRSV
Sequences:
>Translated_399_residues MLHIKPILSSLLRSKSGPVLLLIQIILSVAIVANASFIIQERLALMQRVSGVEESEVLTFSLFNFDPLIDKTAQNKIDQQ ILRGLPNVIDATSTNMLPLSGGGWSSTFNLGPDPDSAKSTPQFAMYLGTDHTLETLGLKLIEGRNFYPHELKDNLDSPSR LAIISSALAKAIWPDESPLGKVLYEGKDAQITVIGVVDKLQGAWIDSSSLENSVIQNVDYGSSSYMVRAKPEFHAELKDA IKKALLAENPNRVLDGFKSIEALKDSSYRDHKLMITVLIMMVVLLLLITSLGLTGMVMFNIQRRTKQIGTRRALGAKKRD IVSYFLVENYLICLAGGVLGGLLAIQLGQQLMKIYSLPMLDLSYPLFTVAGLFIVTTLAVYLPARKAANISPATATRSV >Mature_399_residues MLHIKPILSSLLRSKSGPVLLLIQIILSVAIVANASFIIQERLALMQRVSGVEESEVLTFSLFNFDPLIDKTAQNKIDQQ ILRGLPNVIDATSTNMLPLSGGGWSSTFNLGPDPDSAKSTPQFAMYLGTDHTLETLGLKLIEGRNFYPHELKDNLDSPSR LAIISSALAKAIWPDESPLGKVLYEGKDAQITVIGVVDKLQGAWIDSSSLENSVIQNVDYGSSSYMVRAKPEFHAELKDA IKKALLAENPNRVLDGFKSIEALKDSSYRDHKLMITVLIMMVVLLLLITSLGLTGMVMFNIQRRTKQIGTRRALGAKKRD IVSYFLVENYLICLAGGVLGGLLAIQLGQQLMKIYSLPMLDLSYPLFTVAGLFIVTTLAVYLPARKAANISPATATRSV
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=283, Percent_Identity=25.4416961130742, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 43661; Mature: 43661
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHIKPILSSLLRSKSGPVLLLIQIILSVAIVANASFIIQERLALMQRVSGVEESEVLTF CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SLFNFDPLIDKTAQNKIDQQILRGLPNVIDATSTNMLPLSGGGWSSTFNLGPDPDSAKST EECCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC PQFAMYLGTDHTLETLGLKLIEGRNFYPHELKDNLDSPSRLAIISSALAKAIWPDESPLG CCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHH KVLYEGKDAQITVIGVVDKLQGAWIDSSSLENSVIQNVDYGSSSYMVRAKPEFHAELKDA HHHCCCCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH IKKALLAENPNRVLDGFKSIEALKDSSYRDHKLMITVLIMMVVLLLLITSLGLTGMVMFN HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IQRRTKQIGTRRALGAKKRDIVSYFLVENYLICLAGGVLGGLLAIQLGQQLMKIYSLPML HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DLSYPLFTVAGLFIVTTLAVYLPARKAANISPATATRSV HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLHIKPILSSLLRSKSGPVLLLIQIILSVAIVANASFIIQERLALMQRVSGVEESEVLTF CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SLFNFDPLIDKTAQNKIDQQILRGLPNVIDATSTNMLPLSGGGWSSTFNLGPDPDSAKST EECCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC PQFAMYLGTDHTLETLGLKLIEGRNFYPHELKDNLDSPSRLAIISSALAKAIWPDESPLG CCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHH KVLYEGKDAQITVIGVVDKLQGAWIDSSSLENSVIQNVDYGSSSYMVRAKPEFHAELKDA HHHCCCCCCEEEEEEEHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHH IKKALLAENPNRVLDGFKSIEALKDSSYRDHKLMITVLIMMVVLLLLITSLGLTGMVMFN HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IQRRTKQIGTRRALGAKKRDIVSYFLVENYLICLAGGVLGGLLAIQLGQQLMKIYSLPML HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH DLSYPLFTVAGLFIVTTLAVYLPARKAANISPATATRSV HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA