| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is macB [H]
Identifier: 160874152
GI number: 160874152
Start: 1227927
End: 1229237
Strand: Direct
Name: macB [H]
Synonym: Sbal195_1032
Alternate gene names: 160874152
Gene position: 1227927-1229237 (Clockwise)
Preceding gene: 160874151
Following gene: 160874153
Centisome position: 22.96
GC content: 45.16
Gene sequence:
>1311_bases ATGTTTTTTTATTATGTTGATTTAGCCTGGCGCAGCATTAAGAAAACCCCAGTGCTGTCGCTGTTGATGGTGTTGGCGAT TTCGATAGGTATTGGCATCACAATCACCACGTTAAACGTCTACAAGATGATGTCGTTTAATCCTGCGGGTGAACGCTCAG ATGAGTTAAATGCGGTACAGCTTTGGAGCCAAGGTCCCGATTCTTGGGATGAGCTTAACTCGTTAGTGACTTATCAAGAT GCGATGAATTTGCGCAACAATACCTTACCTAAACGCCAAGCGGCGATGTTTCGCACTGGGATGGCGCTGCAAACTGAGGA TGTCAATTTCGCGCCTATTTTAGAAAGTATTCGGGTGACAGATAGCGACTTTTTTAAGCTGTTTGACGTGCCATTTTTGT ACGGCAATGTGTGGGATAAATCCGTAGACACTGAACCTGCTTATCAAGTGGTGATTAACGATAAACTCAATCAAAAGCTG TTTGCGGGCCAAAACAGTGTCGGCAAGGTTATCTATCTTAATCGTAAACCTTATCAAATAGTGGGGGTGATTAAAGCCTG GGACCCTAAGCCTAAATATTATGATCCCACTAACGGTGCTTTTAACGACACTGAACAAATTTTTGTGCCGTTTTCGCTGA CACCTATCGAAGAGTTTGATGTATGGGGTAACACCTCGGGTTGGAAGTTTGAGACGATGAATAGTTACAGCGATCGCCTT AACTCTGAAAAAGTGTGGCTGCTGTATTGGGTTGAGTTACCCAATAAAGATGCAGTAACCAGTTACCGTTCTTGGCTCAG TAATTATGCGGCGGAGCAAAAAGCATTGGGCCGCTTTACCGATAAAAAATCTGCCGCTGACTCAGTCAAAGTCTCCGATG TCGCGACTTGGCTTGAATACAATCATGTCGTTCCTGAAGATAATAAAATCTTGGTTGGCTTGAGCGCACTATTTTTAAGT GTTTGTTTAGTCAATATATTAGGTTTAATGCTCACTAAGTTCCTCAAGCGAGCGCCTGAAGTTGGGGTACGCCGCGCAAT CGGTGCTAGCCGTGGCCAAATCTTCGCTCAATATATGGTGGAAGTAGGCATGATAGGTTTATTAGGCGGCTTACTGGGAC TCGCTTGGGCTTACGCATCACTTTACGGCTTATCGGCACAGTTTGAGGTCTCGAAGGGGTTAACCCATTTATCGGCGAGT ATGTGGATTATCACTCCTAGTATTGCGGTAGGCACAGCCTTGTTGGCTGGCTTGTATCCCGCGTGGGTCGTGTGCCGGAC TAAACCTAGCGTTTATCTGAAAAGCCAGTAA
Upstream 100 bases:
>100_bases TGTGTGATTTTACTATGTATCAGCCCCATGGCAGTGTGCAAACTGCAGCTTCGCACCCATTAGATAAACTTGTCGCCAAC GCTGACTAAGGATACGCATT
Downstream 100 bases:
>100_bases GGGACTTATTATGTTACATATTAAACCTATTCTCAGCAGTTTGTTGCGCAGTAAAAGCGGTCCTGTCTTACTGCTTATTC AGATTATTTTGTCTGTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MFFYYVDLAWRSIKKTPVLSLLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQLWSQGPDSWDELNSLVTYQD AMNLRNNTLPKRQAAMFRTGMALQTEDVNFAPILESIRVTDSDFFKLFDVPFLYGNVWDKSVDTEPAYQVVINDKLNQKL FAGQNSVGKVIYLNRKPYQIVGVIKAWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDVWGNTSGWKFETMNSYSDRL NSEKVWLLYWVELPNKDAVTSYRSWLSNYAAEQKALGRFTDKKSAADSVKVSDVATWLEYNHVVPEDNKILVGLSALFLS VCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMVEVGMIGLLGGLLGLAWAYASLYGLSAQFEVSKGLTHLSAS MWIITPSIAVGTALLAGLYPAWVVCRTKPSVYLKSQ
Sequences:
>Translated_436_residues MFFYYVDLAWRSIKKTPVLSLLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQLWSQGPDSWDELNSLVTYQD AMNLRNNTLPKRQAAMFRTGMALQTEDVNFAPILESIRVTDSDFFKLFDVPFLYGNVWDKSVDTEPAYQVVINDKLNQKL FAGQNSVGKVIYLNRKPYQIVGVIKAWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDVWGNTSGWKFETMNSYSDRL NSEKVWLLYWVELPNKDAVTSYRSWLSNYAAEQKALGRFTDKKSAADSVKVSDVATWLEYNHVVPEDNKILVGLSALFLS VCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMVEVGMIGLLGGLLGLAWAYASLYGLSAQFEVSKGLTHLSAS MWIITPSIAVGTALLAGLYPAWVVCRTKPSVYLKSQ >Mature_436_residues MFFYYVDLAWRSIKKTPVLSLLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQLWSQGPDSWDELNSLVTYQD AMNLRNNTLPKRQAAMFRTGMALQTEDVNFAPILESIRVTDSDFFKLFDVPFLYGNVWDKSVDTEPAYQVVINDKLNQKL FAGQNSVGKVIYLNRKPYQIVGVIKAWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDVWGNTSGWKFETMNSYSDRL NSEKVWLLYWVELPNKDAVTSYRSWLSNYAAEQKALGRFTDKKSAADSVKVSDVATWLEYNHVVPEDNKILVGLSALFLS VCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMVEVGMIGLLGGLLGLAWAYASLYGLSAQFEVSKGLTHLSAS MWIITPSIAVGTALLAGLYPAWVVCRTKPSVYLKSQ
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 48954; Mature: 48954
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFYYVDLAWRSIKKTPVLSLLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQ CEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCEE LWSQGPDSWDELNSLVTYQDAMNLRNNTLPKRQAAMFRTGMALQTEDVNFAPILESIRVT EECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCC DSDFFKLFDVPFLYGNVWDKSVDTEPAYQVVINDKLNQKLFAGQNSVGKVIYLNRKPYQI CCHHHHHHCCCHHCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEEEEECCCCEEE VGVIKAWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDVWGNTSGWKFETMNSYSDRL EEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCCEEEECCHHHHCC NSEKVWLLYWVELPNKDAVTSYRSWLSNYAAEQKALGRFTDKKSAADSVKVSDVATWLEY CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHH NHVVPEDNKILVGLSALFLSVCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMV CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH EVGMIGLLGGLLGLAWAYASLYGLSAQFEVSKGLTHLSASMWIITPSIAVGTALLAGLYP HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCHHHHCCEEEEEECHHHHHHHHHHHHCC AWVVCRTKPSVYLKSQ CEEEEECCCCEEEECC >Mature Secondary Structure MFFYYVDLAWRSIKKTPVLSLLMVLAISIGIGITITTLNVYKMMSFNPAGERSDELNAVQ CEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCCCCEE LWSQGPDSWDELNSLVTYQDAMNLRNNTLPKRQAAMFRTGMALQTEDVNFAPILESIRVT EECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHCCC DSDFFKLFDVPFLYGNVWDKSVDTEPAYQVVINDKLNQKLFAGQNSVGKVIYLNRKPYQI CCHHHHHHCCCHHCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCEEEEECCCCEEE VGVIKAWDPKPKYYDPTNGAFNDTEQIFVPFSLTPIEEFDVWGNTSGWKFETMNSYSDRL EEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCCEEEECCHHHHCC NSEKVWLLYWVELPNKDAVTSYRSWLSNYAAEQKALGRFTDKKSAADSVKVSDVATWLEY CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHH NHVVPEDNKILVGLSALFLSVCLVNILGLMLTKFLKRAPEVGVRRAIGASRGQIFAQYMV CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH EVGMIGLLGGLLGLAWAYASLYGLSAQFEVSKGLTHLSASMWIITPSIAVGTALLAGLYP HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCHHHHCCEEEEEECHHHHHHHHHHHHCC AWVVCRTKPSVYLKSQ CEEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA