| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yigI [H]
Identifier: 160873519
GI number: 160873519
Start: 446016
End: 446480
Strand: Reverse
Name: yigI [H]
Synonym: Sbal195_0394
Alternate gene names: 160873519
Gene position: 446480-446016 (Counterclockwise)
Preceding gene: 160873521
Following gene: 160873518
Centisome position: 8.35
GC content: 54.41
Gene sequence:
>465_bases ATGACCAGTCCAATCCAAGCCGAAGCTTTGAGAAGAGTCGCAGCAGTATTTGATCAACATGTCCCTTTCCATAATCTACT CGGACTCGATATCAAGCGTTATGACATTGATGGCGTTGAAGTCGTGATCAACATGAAGCCTGAGCTGATTGGCAATATCC ACCAGCAAATCCTCCACGGCGGTGTGACCGCAACGGTACTCGATGTGGTTGGCGGACTCACCGCCTTTGCAGGACTGGTT GCCAGTCGTGATGATTGGACGGTCGAAGAGCTGCAGCAACGCCTGCAAACCCTAGGCACTATCGACATGCGCGTCGATTA TCTGCGGCCGGGGCGCGGCCTCACCTTTACCGGGACGGGCAGCGTGATCCGTGCGGGCAATCGGGTGTCGGTGTGCCGCA TGGAATTGCATAATGAGCAAGGCACACATATCGCTTTTGGGACAGGCACTTATATGGTGGGCTAG
Upstream 100 bases:
>100_bases CACTGTAGATTAATTGCTCTAAGCCGCACTTTGTTCATCTCAGTGTTGATAACAAATCCAATTACGCCTAATGCAGTCAC TCAGTGACAAGGACCCAATA
Downstream 100 bases:
>100_bases CCGCTTCACCGCAGAACACTCATTTACCGTCTTAAAGTTCAAAGCCAGTAAACATCTTGATTAGTAAGATGTTTACTGGC GTTGATCGGCCACTCAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTSPIQAEALRRVAAVFDQHVPFHNLLGLDIKRYDIDGVEVVINMKPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLV ASRDDWTVEELQQRLQTLGTIDMRVDYLRPGRGLTFTGTGSVIRAGNRVSVCRMELHNEQGTHIAFGTGTYMVG
Sequences:
>Translated_154_residues MTSPIQAEALRRVAAVFDQHVPFHNLLGLDIKRYDIDGVEVVINMKPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLV ASRDDWTVEELQQRLQTLGTIDMRVDYLRPGRGLTFTGTGSVIRAGNRVSVCRMELHNEQGTHIAFGTGTYMVG >Mature_153_residues TSPIQAEALRRVAAVFDQHVPFHNLLGLDIKRYDIDGVEVVINMKPELIGNIHQQILHGGVTATVLDVVGGLTAFAGLVA SRDDWTVEELQQRLQTLGTIDMRVDYLRPGRGLTFTGTGSVIRAGNRVSVCRMELHNEQGTHIAFGTGTYMVG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082336, Length=155, Percent_Identity=47.0967741935484, Blast_Score=153, Evalue=4e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 16825; Mature: 16693
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPIQAEALRRVAAVFDQHVPFHNLLGLDIKRYDIDGVEVVINMKPELIGNIHQQILHG CCCCHHHHHHHHHHHHHHCCCCHHHHHCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHC GVTATVLDVVGGLTAFAGLVASRDDWTVEELQQRLQTLGTIDMRVDYLRPGRGLTFTGTG CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHEEEEEECCCCCEEEECCC SVIRAGNRVSVCRMELHNEQGTHIAFGTGTYMVG CEEECCCCEEEEEEEECCCCCCEEEEECCEEECC >Mature Secondary Structure TSPIQAEALRRVAAVFDQHVPFHNLLGLDIKRYDIDGVEVVINMKPELIGNIHQQILHG CCCHHHHHHHHHHHHHHCCCCHHHHHCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHC GVTATVLDVVGGLTAFAGLVASRDDWTVEELQQRLQTLGTIDMRVDYLRPGRGLTFTGTG CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHEEEEEECCCCCEEEECCC SVIRAGNRVSVCRMELHNEQGTHIAFGTGTYMVG CEEECCCCEEEEEEEECCCCCCEEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]