| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873521
Identifier: 160873521
GI number: 160873521
Start: 448725
End: 450506
Strand: Reverse
Name: 160873521
Synonym: Sbal195_0396
Alternate gene names: NA
Gene position: 450506-448725 (Counterclockwise)
Preceding gene: 160873528
Following gene: 160873519
Centisome position: 8.42
GC content: 45.34
Gene sequence:
>1782_bases ATGGATTTTCGCGTCTTGGTACTGAGCCTGTTGTTATGGCTGATCCCCTTTGGGGCGAGTGCTATAGACCAGTTGGATGA GCTCACAGAACTCGTCTACCAATATCCCAGTAAAGCCCTGACTCAAATCACAGCCTTAGAAAAACAATTTACGACCCGCG CCACTTCTGACATTAATCGACTCAGATTGAGTGTATTGAAATGCCAAAATCTGCTGCAACTGGGTGAGAACGAAGCCGCG ATCAACGTAGCTCAGTTAGGCGAGGCCAATGCTAAGCAGCTTAAGCTCGATCAAGTTCGCCCCTACTTTTTGATTTGCCA AGCCGACGCCAACCTCAACTACAACAATATTCAGAATGCGCTGCCCTTACTGGATTCAGCCATTACCTTAGCGCGACGCT ATCAACAACCCCAAGCCTTAGTCGATGCCTTGCGTTTACGTGGTCAGCTCGATACCGACACCGATAACTTTTCCTCTGCC ATCGAAGATTTACGTCTGGCCATCGATATTTATCCAGACATTCATACTCAGACCCAGAATTGGGTTTGGCCACCACAGGC TTATATTTATGCGGCCATGGGTAATTTACTCTACGCAACCCATGATTTCCCTCAGGCCATGTATTACACCAACTTAGGGA TACAGAGCTCAGATGCCAAGGGCAAGGTATTACATATCATTCTACGAAATGCGGCCAGAATAGCGCTCGATAATCAAGAA TTCGATTACAGTGATAAACTCGAAAAACAAGCAAAGGCACTACTACCTGAACTCGGTTCGCCACTTGAACTTGCCTACAG CTATGCCATTTTAGCTTCAATCGCACTCGATAAAGGCCGCATCGACACAGCCGAAGAATACCTTTCTATCGCCATCAATA CCTTCAAGAAGCACAATCAGCAATTGGCTATGATGCGCTCGACCCGTCTGCTGGCACAAATACGCTTTGCCCAACATCAA GACGATGCCGCATTAATCCTAATGAATCACGCCATTGAACAAGCTGAAAATCTAAAACAGTATTCTGATCTCAAAGGATT TTACGGGATCATGAGCGATCACTACTTAGAACAAGGGGATTTTAAGCAGGCCTATTCTTTCTTACTCAAACGCTATCGAG CTGCCGAACTCGCCAATCAAGGGATGAACACTGCACGGATATTGCAATTTAAAGCCCGCCTGAATCAACAAGATTTGCAA CAGGATCAGAATAGTCCTGCGCCACAAAAAGCATCGATCCTCCAAGAGTTGAATCTAGATTGGGCCTATAGCACTTTGTT CTTAATTGCGATGACGTTACTCGGCGGGGCTATTTGGTATTTGATTGATAAGCAAAATAATCGAGCGCCCCGTATCGAAG GCGAGGAGCCTGCGGAAACTCTGCTCCAACAAGTCACATCGGCCTTAAACATTGCCAAACAAGGTAATTATCCGCTGTCT TTATTACTTTTTAATGCGAGTCAAATACGGCAAGTTGACTTGCCGCCCCTGCAAGATGAGCTACAGCACAGATTGCGAGA GCAAGATAAGTTGATCCGATATTCGATGGATGAAATTGTGATTATCCTACCGCACACCTCTGCTGCTGGTGCTAAGAAAG TCGTCAATCAATTAGTGGCGTGTATTCAGCCTTGGCAGGGGTCAAGCAAGGTCAATATTGGTATCGCGGCAATGCAACAG TTTGATACGTTAGAGTCTTTAATTAAACGCGCCAGTATCAATCAATTGGGTAAGGTTAAAATCAGTGAGAATAATCCAAA CCATTATTCTCCCGCTAAATAA
Upstream 100 bases:
>100_bases AGAAAATAATAGTTTTTTATGCAAAAAACGATTAAGAAAAGTTATAATCTCGCCTTAGTGATTACGGATATTAGAGCTTA CGCATTTTATGGAGCACAAA
Downstream 100 bases:
>100_bases GCCTCAATTTCATCGAGAAAAGCGTCGCCGAAACGACTCAGTTTACGCTCGCCAACCCCGTTGACGGCGAGCATTTCCCC TGCACTGGTCGGCATCATGG
Product: response regulator receiver protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MDFRVLVLSLLLWLIPFGASAIDQLDELTELVYQYPSKALTQITALEKQFTTRATSDINRLRLSVLKCQNLLQLGENEAA INVAQLGEANAKQLKLDQVRPYFLICQADANLNYNNIQNALPLLDSAITLARRYQQPQALVDALRLRGQLDTDTDNFSSA IEDLRLAIDIYPDIHTQTQNWVWPPQAYIYAAMGNLLYATHDFPQAMYYTNLGIQSSDAKGKVLHIILRNAARIALDNQE FDYSDKLEKQAKALLPELGSPLELAYSYAILASIALDKGRIDTAEEYLSIAINTFKKHNQQLAMMRSTRLLAQIRFAQHQ DDAALILMNHAIEQAENLKQYSDLKGFYGIMSDHYLEQGDFKQAYSFLLKRYRAAELANQGMNTARILQFKARLNQQDLQ QDQNSPAPQKASILQELNLDWAYSTLFLIAMTLLGGAIWYLIDKQNNRAPRIEGEEPAETLLQQVTSALNIAKQGNYPLS LLLFNASQIRQVDLPPLQDELQHRLREQDKLIRYSMDEIVIILPHTSAAGAKKVVNQLVACIQPWQGSSKVNIGIAAMQQ FDTLESLIKRASINQLGKVKISENNPNHYSPAK
Sequences:
>Translated_593_residues MDFRVLVLSLLLWLIPFGASAIDQLDELTELVYQYPSKALTQITALEKQFTTRATSDINRLRLSVLKCQNLLQLGENEAA INVAQLGEANAKQLKLDQVRPYFLICQADANLNYNNIQNALPLLDSAITLARRYQQPQALVDALRLRGQLDTDTDNFSSA IEDLRLAIDIYPDIHTQTQNWVWPPQAYIYAAMGNLLYATHDFPQAMYYTNLGIQSSDAKGKVLHIILRNAARIALDNQE FDYSDKLEKQAKALLPELGSPLELAYSYAILASIALDKGRIDTAEEYLSIAINTFKKHNQQLAMMRSTRLLAQIRFAQHQ DDAALILMNHAIEQAENLKQYSDLKGFYGIMSDHYLEQGDFKQAYSFLLKRYRAAELANQGMNTARILQFKARLNQQDLQ QDQNSPAPQKASILQELNLDWAYSTLFLIAMTLLGGAIWYLIDKQNNRAPRIEGEEPAETLLQQVTSALNIAKQGNYPLS LLLFNASQIRQVDLPPLQDELQHRLREQDKLIRYSMDEIVIILPHTSAAGAKKVVNQLVACIQPWQGSSKVNIGIAAMQQ FDTLESLIKRASINQLGKVKISENNPNHYSPAK >Mature_593_residues MDFRVLVLSLLLWLIPFGASAIDQLDELTELVYQYPSKALTQITALEKQFTTRATSDINRLRLSVLKCQNLLQLGENEAA INVAQLGEANAKQLKLDQVRPYFLICQADANLNYNNIQNALPLLDSAITLARRYQQPQALVDALRLRGQLDTDTDNFSSA IEDLRLAIDIYPDIHTQTQNWVWPPQAYIYAAMGNLLYATHDFPQAMYYTNLGIQSSDAKGKVLHIILRNAARIALDNQE FDYSDKLEKQAKALLPELGSPLELAYSYAILASIALDKGRIDTAEEYLSIAINTFKKHNQQLAMMRSTRLLAQIRFAQHQ DDAALILMNHAIEQAENLKQYSDLKGFYGIMSDHYLEQGDFKQAYSFLLKRYRAAELANQGMNTARILQFKARLNQQDLQ QDQNSPAPQKASILQELNLDWAYSTLFLIAMTLLGGAIWYLIDKQNNRAPRIEGEEPAETLLQQVTSALNIAKQGNYPLS LLLFNASQIRQVDLPPLQDELQHRLREQDKLIRYSMDEIVIILPHTSAAGAKKVVNQLVACIQPWQGSSKVNIGIAAMQQ FDTLESLIKRASINQLGKVKISENNPNHYSPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66989; Mature: 66989
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFRVLVLSLLLWLIPFGASAIDQLDELTELVYQYPSKALTQITALEKQFTTRATSDINR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LRLSVLKCQNLLQLGENEAAINVAQLGEANAKQLKLDQVRPYFLICQADANLNYNNIQNA HHHHHHHHHHHHHCCCCCCEEEHHHHCCCCHHHEECCCCCCEEEEEEECCCCCHHHHHHH LPLLDSAITLARRYQQPQALVDALRLRGQLDTDTDNFSSAIEDLRLAIDIYPDIHTQTQN HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCC WVWPPQAYIYAAMGNLLYATHDFPQAMYYTNLGIQSSDAKGKVLHIILRNAARIALDNQE CCCCCHHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCHHEEECCCC FDYSDKLEKQAKALLPELGSPLELAYSYAILASIALDKGRIDTAEEYLSIAINTFKKHNQ CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QLAMMRSTRLLAQIRFAQHQDDAALILMNHAIEQAENLKQYSDLKGFYGIMSDHYLEQGD HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FKQAYSFLLKRYRAAELANQGMNTARILQFKARLNQQDLQQDQNSPAPQKASILQELNLD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCC WAYSTLFLIAMTLLGGAIWYLIDKQNNRAPRIEGEEPAETLLQQVTSALNIAKQGNYPLS HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE LLLFNASQIRQVDLPPLQDELQHRLREQDKLIRYSMDEIVIILPHTSAAGAKKVVNQLVA EEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH CIQPWQGSSKVNIGIAAMQQFDTLESLIKRASINQLGKVKISENNPNHYSPAK HHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHCEEEEECCCCCCCCCCC >Mature Secondary Structure MDFRVLVLSLLLWLIPFGASAIDQLDELTELVYQYPSKALTQITALEKQFTTRATSDINR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LRLSVLKCQNLLQLGENEAAINVAQLGEANAKQLKLDQVRPYFLICQADANLNYNNIQNA HHHHHHHHHHHHHCCCCCCEEEHHHHCCCCHHHEECCCCCCEEEEEEECCCCCHHHHHHH LPLLDSAITLARRYQQPQALVDALRLRGQLDTDTDNFSSAIEDLRLAIDIYPDIHTQTQN HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCC WVWPPQAYIYAAMGNLLYATHDFPQAMYYTNLGIQSSDAKGKVLHIILRNAARIALDNQE CCCCCHHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCHHEEECCCC FDYSDKLEKQAKALLPELGSPLELAYSYAILASIALDKGRIDTAEEYLSIAINTFKKHNQ CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH QLAMMRSTRLLAQIRFAQHQDDAALILMNHAIEQAENLKQYSDLKGFYGIMSDHYLEQGD HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FKQAYSFLLKRYRAAELANQGMNTARILQFKARLNQQDLQQDQNSPAPQKASILQELNLD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHCCC WAYSTLFLIAMTLLGGAIWYLIDKQNNRAPRIEGEEPAETLLQQVTSALNIAKQGNYPLS HHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE LLLFNASQIRQVDLPPLQDELQHRLREQDKLIRYSMDEIVIILPHTSAAGAKKVVNQLVA EEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH CIQPWQGSSKVNIGIAAMQQFDTLESLIKRASINQLGKVKISENNPNHYSPAK HHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA