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The map label for this gene is walR

Identifier: 16081093

GI number: 16081093

Start: 4153696

End: 4154403

Strand: Reverse

Name: walR

Synonym: BSU40410

Alternate gene names: 16081093

Gene position: 4154403-4153696 (Counterclockwise)

Preceding gene: 16081094

Following gene: 16081092

Centisome position: 98.55

GC content: 45.06

Gene sequence:

>708_bases
ATGGATAAAAAGATCCTTGTAGTAGATGATGAAAAACCGATTGCAGATATATTGGAATTTAACTTAAGAAAAGAAGGCTA
TGAAGTGCACTGTGCCCACGACGGAAACGAAGCCGTTGAAATGGTAGAAGAGCTTCAGCCTGATTTAATTCTTTTAGATA
TTATGCTCCCAAATAAAGACGGCGTTGAAGTATGCCGCGAAGTCAGAAAGAAATACGATATGCCAATCATTATGCTGACG
GCTAAGGATTCAGAAATTGACAAGGTTATCGGGCTTGAAATCGGTGCTGATGACTATGTCACAAAACCATTCAGCACACG
CGAGCTCTTGGCGCGTGTAAAAGCGAACCTGCGCCGCCAGCTGACAACAGCGCCTGCGGAGGAAGAGCCTTCCTCTAACG
AGATTCATATCGGCTCTCTCGTCATCTTCCCTGACGCGTACGTTGTATCAAAACGAGACGAAACAATCGAATTGACTCAT
CGTGAGTTCGAATTGCTTCATTATTTAGCAAAACATATCGGACAAGTGATGACCCGTGAACATTTGCTTCAAACCGTTTG
GGGCTATGATTACTTCGGCGATGTCAGAACGGTTGACGTAACAGTCCGCCGGCTTCGTGAAAAAATCGAGGACAACCCGA
GCCATCCAAATTGGATCGTCACACGCCGTGGTGTAGGTTATTACTTGAGAAACCCAGAACAGGACTAA

Upstream 100 bases:

>100_bases
TTATAATAGACAAGGACCCATTCTTTACATGGGCCATAAGTGATGAAACGAATGTTATATAGATGAAATGAAGTCATTCG
GCAGGAGGAAAATCAAAATG

Downstream 100 bases:

>100_bases
TGCCCATATGAATAAGGTTGGTTTTTTTCGGTCGATCCAATTTAAGATTACCTTGATTTATGTGCTTTTGATTATCATTG
CCATGCAAATCATTGGTGTG

Product: two-component response regulator YycG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLT
AKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQLTTAPAEEEPSSNEIHIGSLVIFPDAYVVSKRDETIELTH
REFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD

Sequences:

>Translated_235_residues
MDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLT
AKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQLTTAPAEEEPSSNEIHIGSLVIFPDAYVVSKRDETIELTH
REFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD
>Mature_235_residues
MDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLT
AKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQLTTAPAEEEPSSNEIHIGSLVIFPDAYVVSKRDETIELTH
REFELLHYLAKHIGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH, ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF. Binds to the ftsAZ P1 promoter seque

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain

Homologues:

Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=39.9122807017544, Blast_Score=170, Evalue=6e-44,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=41.7391304347826, Blast_Score=169, Evalue=1e-43,
Organism=Escherichia coli, GI2367329, Length=227, Percent_Identity=41.4096916299559, Blast_Score=164, Evalue=4e-42,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=39.5555555555556, Blast_Score=153, Evalue=8e-39,
Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=37.0535714285714, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI145693140, Length=228, Percent_Identity=37.719298245614, Blast_Score=147, Evalue=4e-37,
Organism=Escherichia coli, GI1786784, Length=231, Percent_Identity=37.6623376623377, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790863, Length=225, Percent_Identity=36, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1790860, Length=235, Percent_Identity=37.8723404255319, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1786911, Length=231, Percent_Identity=35.9307359307359, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=34.7826086956522, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1789402, Length=227, Percent_Identity=32.15859030837, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1790552, Length=233, Percent_Identity=32.618025751073, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=33.1858407079646, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=36.4406779661017, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1790437, Length=114, Percent_Identity=35.9649122807018, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790299, Length=111, Percent_Identity=32.4324324324324, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787487, Length=102, Percent_Identity=29.4117647058824, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YYCF_BACSU (P37478)

Other databases:

- EMBL:   D26185
- EMBL:   D78193
- EMBL:   AL009126
- PIR:   S65967
- RefSeq:   NP_391921.1
- PDB:   2D1V
- PDB:   2ZWM
- PDB:   3F6P
- PDBsum:   2D1V
- PDBsum:   2ZWM
- PDBsum:   3F6P
- ProteinModelPortal:   P37478
- EnsemblBacteria:   EBBACT00000001518
- GeneID:   937776
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU40410
- NMPDR:   fig|224308.1.peg.4047
- GenoList:   BSU40410
- GeneTree:   EBGT00070000031753
- HOGENOM:   HBG753323
- OMA:   DEDKNIT
- PhylomeDB:   P37478
- ProtClustDB:   CLSK2391287
- BioCyc:   BSUB:BSU40410-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00448
- SMART:   SM00862

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C; SSF52172 CheY_like

EC number: NA

Molecular weight: Translated: 27226; Mature: 27226

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKD
CCCEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCC
GVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQ
HHHHHHHHHHHCCCCEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
LTTAPAEEEPSSNEIHIGSLVIFPDAYVVSKRDETIELTHREFELLHYLAKHIGQVMTRE
HHCCCCCCCCCCCCEEEEEEEEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
HLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCC
>Mature Secondary Structure
MDKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIMLPNKD
CCCEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEECCCC
GVEVCREVRKKYDMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRRQ
HHHHHHHHHHHCCCCEEEEEECCCCCHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
LTTAPAEEEPSSNEIHIGSLVIFPDAYVVSKRDETIELTHREFELLHYLAKHIGQVMTRE
HHCCCCCCCCCCCCEEEEEEEEECCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
HLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPNWIVTRRGVGYYLRNPEQD
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 9829949; 10878122