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The map label for this gene is rodA

Identifier: 16080863

GI number: 16080863

Start: 3912332

End: 3913513

Strand: Reverse

Name: rodA

Synonym: BSU38120

Alternate gene names: 16080863

Gene position: 3913513-3912332 (Counterclockwise)

Preceding gene: 16080865

Following gene: 16080862

Centisome position: 92.83

GC content: 37.73

Gene sequence:

>1182_bases
ATGAGTCGATATAAGAAACAGCAAAGCCCCTTTTACCAGGGGGATTTGATTTTTATATTTGGTGTGTTTTTTATTATAAG
CGTAGTATCAATATATGCTGCCGGTCAGTTTGGGCAGTATGGGAACACGGATTGGATTCAGCAAATTGTGTTTTATCTTT
TGGGGGCTGTAGCCATTACAGTTCTTTTGTACTTTGATTTAGAACAGCTTGAAAAGTTAAGTTTATATATTTTTATCATT
GGTATTTTATCTTTGATTATTCTTAAAATCAGTCCCGAGTCTATTGCACCTGTTATTAAAGGGGCAAAAAGTTGGTTTAG
GATCGGTAGAATAACAATACAGCCGTCAGAGTTTATGAAGGTTGGTTTGATTATGATGCTTGCTTCAGTTATTGGAAAAG
CAAATCCTAAAGGAGTTCGGACGCTTAGGGATGATATCCACTTGTTATTAAAGATTGCGGGTGTCGCAGTTATTCCTGTA
GGTCTTATCCTGATGCAGGATGCTGGGACTGCGGGAATATGTATGTTTATCGTTCTTGTAATGGTTTTTATGTCAGGGAT
AAATTGGAAATTGATTGCGATCATAGCTGGTTCAGGTATCTTACTCATTTCATTAATTTTATTAGTAATGATAAACTTTC
CTGACGTTGCTAAATCAGTTGGAATACAGGATTATCAAATTAAGCGGGTCACTTCTTGGGTGTCTGCTTCAAATGAGACA
CAGGAAGATTCAAATGACAGCTGGCAAGTTGACCAGGCCATCATGGCAATAGGATCTGGTGGTATTTTAGGTAATGGTAT
TTCTAATTTGAAGGTTTATGTTCCAGAGAGTACGACTGACTTTATCTTTTCTATAATAGGTGAGTCATTTGGCTTTATAG
GCTGTGCAATTGTTGTCATCATGTTCTTCTTTTTAATCTACAGGCTTGTTGTTCTGATAGACAAAATACATCCGTTTAAC
CGTTTCGCTTCTTTCTTTTGCGTTGGCTATACGGCGTTAATTGTGATCCACACATTCCAGAATATCGGAATGAACATTGG
CATTATGCCTGTTACCGGGATTCCGCTGCTGTTTGTCAGCTATGGGGGAAGCTCGACACTTTCCACGTTAATCGGATTTG
GGATTGTATATAATGCAAGTGTGCAGCTGACGAAATACAGAAGTTATCTTTTTAATTCTTGA

Upstream 100 bases:

>100_bases
AAAAAACATAAAAGGAAGCGAGCTTCACGTGTCATCTTGAACGTGGTTCATGTATAATAAACATTAGTGATTTTCCGATG
AAAATGTAAGGCGGGATAGA

Downstream 100 bases:

>100_bases
TATGCAGACAGCCTTTACAGAGGCTGTCTTTTTTTGTGCAGAGCATTTCACTTTTGAGATCACTTTTTTTCGGATATGAT
AAAAAGTGATAAGGAGGTTT

Product: factor involved in extension of the lateral walls of the cell

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MSRYKKQQSPFYQGDLIFIFGVFFIISVVSIYAAGQFGQYGNTDWIQQIVFYLLGAVAITVLLYFDLEQLEKLSLYIFII
GILSLIILKISPESIAPVIKGAKSWFRIGRITIQPSEFMKVGLIMMLASVIGKANPKGVRTLRDDIHLLLKIAGVAVIPV
GLILMQDAGTAGICMFIVLVMVFMSGINWKLIAIIAGSGILLISLILLVMINFPDVAKSVGIQDYQIKRVTSWVSASNET
QEDSNDSWQVDQAIMAIGSGGILGNGISNLKVYVPESTTDFIFSIIGESFGFIGCAIVVIMFFFLIYRLVVLIDKIHPFN
RFASFFCVGYTALIVIHTFQNIGMNIGIMPVTGIPLLFVSYGGSSTLSTLIGFGIVYNASVQLTKYRSYLFNS

Sequences:

>Translated_393_residues
MSRYKKQQSPFYQGDLIFIFGVFFIISVVSIYAAGQFGQYGNTDWIQQIVFYLLGAVAITVLLYFDLEQLEKLSLYIFII
GILSLIILKISPESIAPVIKGAKSWFRIGRITIQPSEFMKVGLIMMLASVIGKANPKGVRTLRDDIHLLLKIAGVAVIPV
GLILMQDAGTAGICMFIVLVMVFMSGINWKLIAIIAGSGILLISLILLVMINFPDVAKSVGIQDYQIKRVTSWVSASNET
QEDSNDSWQVDQAIMAIGSGGILGNGISNLKVYVPESTTDFIFSIIGESFGFIGCAIVVIMFFFLIYRLVVLIDKIHPFN
RFASFFCVGYTALIVIHTFQNIGMNIGIMPVTGIPLLFVSYGGSSTLSTLIGFGIVYNASVQLTKYRSYLFNS
>Mature_392_residues
SRYKKQQSPFYQGDLIFIFGVFFIISVVSIYAAGQFGQYGNTDWIQQIVFYLLGAVAITVLLYFDLEQLEKLSLYIFIIG
ILSLIILKISPESIAPVIKGAKSWFRIGRITIQPSEFMKVGLIMMLASVIGKANPKGVRTLRDDIHLLLKIAGVAVIPVG
LILMQDAGTAGICMFIVLVMVFMSGINWKLIAIIAGSGILLISLILLVMINFPDVAKSVGIQDYQIKRVTSWVSASNETQ
EDSNDSWQVDQAIMAIGSGGILGNGISNLKVYVPESTTDFIFSIIGESFGFIGCAIVVIMFFFLIYRLVVLIDKIHPFNR
FASFFCVGYTALIVIHTFQNIGMNIGIMPVTGIPLLFVSYGGSSTLSTLIGFGIVYNASVQLTKYRSYLFNS

Specific function: This Is A Septum-Peptidoglycan Biosynthetic Protein, Involved In Cell Wall Formation. Plays A Role In The Stabilization Of The Ftsz Ring During Cell Division. [C]

COG id: COG0772

COG function: function code D; Bacterial cell division membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ftsW/rodA/spoVE family

Homologues:

Organism=Escherichia coli, GI1786277, Length=353, Percent_Identity=29.1784702549575, Blast_Score=128, Evalue=8e-31,
Organism=Escherichia coli, GI1786853, Length=350, Percent_Identity=29.4285714285714, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWCF_BACSU (P39604)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39697
- RefSeq:   NP_391691.1
- ProteinModelPortal:   P39604
- EnsemblBacteria:   EBBACT00000003094
- GeneID:   937294
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU38120
- NMPDR:   fig|224308.1.peg.3817
- GenoList:   BSU38120
- GeneTree:   EBGT00050000001005
- HOGENOM:   HBG729614
- OMA:   RIDWVLI
- ProtClustDB:   CLSK888096
- BioCyc:   BSUB:BSU38120-MONOMER
- InterPro:   IPR001182
- InterPro:   IPR018365

Pfam domain/function: PF01098 FTSW_RODA_SPOVE

EC number: NA

Molecular weight: Translated: 43275; Mature: 43144

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00428 FTSW_RODA_SPOVE; PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12574b84)-; HASH(0x129605bc)-; HASH(0x12660ae4)-; HASH(0x132a1fec)-; HASH(0x12c8a9a0)-; HASH(0x12f7f1b8)-; HASH(0x131a9ebc)-; HASH(0x132781f8)-; HASH(0x132e0f0c)-; HASH(0x40bf4ca0)-; HASH(0x1308b1f4)-; HASH(0x1315cd6c)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYKKQQSPFYQGDLIFIFGVFFIISVVSIYAAGQFGQYGNTDWIQQIVFYLLGAVAIT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VLLYFDLEQLEKLSLYIFIIGILSLIILKISPESIAPVIKGAKSWFRIGRITIQPSEFMK
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECHHHHHH
VGLIMMLASVIGKANPKGVRTLRDDIHLLLKIAGVAVIPVGLILMQDAGTAGICMFIVLV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHH
MVFMSGINWKLIAIIAGSGILLISLILLVMINFPDVAKSVGIQDYQIKRVTSWVSASNET
HHHHCCCCEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCC
QEDSNDSWQVDQAIMAIGSGGILGNGISNLKVYVPESTTDFIFSIIGESFGFIGCAIVVI
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
MFFFLIYRLVVLIDKIHPFNRFASFFCVGYTALIVIHTFQNIGMNIGIMPVTGIPLLFVS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEE
YGGSSTLSTLIGFGIVYNASVQLTKYRSYLFNS
CCCCHHHHHHHHHHHHEECCCHHHHHHHHHCCH
>Mature Secondary Structure 
SRYKKQQSPFYQGDLIFIFGVFFIISVVSIYAAGQFGQYGNTDWIQQIVFYLLGAVAIT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
VLLYFDLEQLEKLSLYIFIIGILSLIILKISPESIAPVIKGAKSWFRIGRITIQPSEFMK
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECHHHHHH
VGLIMMLASVIGKANPKGVRTLRDDIHLLLKIAGVAVIPVGLILMQDAGTAGICMFIVLV
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHH
MVFMSGINWKLIAIIAGSGILLISLILLVMINFPDVAKSVGIQDYQIKRVTSWVSASNET
HHHHCCCCEEEEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCC
QEDSNDSWQVDQAIMAIGSGGILGNGISNLKVYVPESTTDFIFSIIGESFGFIGCAIVVI
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
MFFFLIYRLVVLIDKIHPFNRFASFFCVGYTALIVIHTFQNIGMNIGIMPVTGIPLLFVS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEE
YGGSSTLSTLIGFGIVYNASVQLTKYRSYLFNS
CCCCHHHHHHHHHHHHEECCCHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377