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The map label for this gene is qoxD

Identifier: 16080865

GI number: 16080865

Start: 3914315

End: 3914689

Strand: Reverse

Name: qoxD

Synonym: BSU38140

Alternate gene names: 16080865

Gene position: 3914689-3914315 (Counterclockwise)

Preceding gene: 16080866

Following gene: 16080863

Centisome position: 92.86

GC content: 48.0

Gene sequence:

>375_bases
ATGGCAAACAAATCTGCTGAACACAGTCACTTTCCATGGAAACACATTGTAGGTTTTATCCTGTCTATCGTTTTGACCCT
GCTGGCTCTATGGGTTGCAGTGTATACTGACCTGAGCTCATCAGCAAAACTTTGGATTATCTTCGGCTTCGCCTTCATTC
AGGCGGCGCTGCAGCTTCTCATGTTCATGCATATGACAGAGAGCGAAAACGGCACGATCCAAGTCGGAAACACGCTGTTC
GGATTCTTTGGCGCGATCGTTATCGTACTTGGATCCATCTGGATTTTCGCGGCTCACTATCACCATGGTGACCATATGGA
CGGAAATCCTCCTGGAGGCGCTGAACACTCAGAGCATTCAGGCCATAACGAATAA

Upstream 100 bases:

>100_bases
TCTAAAATCTTTATCTCAAGCTTGTACTGGCACTTCTTAGATGTTGTATGGATTTTCATCTTTACAGGTGTCTATCTCAT
GGGATTGGGGGGTCTGTAAA

Downstream 100 bases:

>100_bases
TACAAAAAACCCTCTTCAGTGGAAGAGGGTTTTTTGCTGTCTTCAGCTGCTTCGCTTTCTGCGAAGATACGGAAGGCCGT
AAATGATAAATGCGGCGATA

Product: cytochrome aa3-600 quinol oxidase subunit IV

Products: NA

Alternate protein names: Quinol oxidase aa3-600, subunit qoxD; Quinol oxidase polypeptide IV [H]

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MANKSAEHSHFPWKHIVGFILSIVLTLLALWVAVYTDLSSSAKLWIIFGFAFIQAALQLLMFMHMTESENGTIQVGNTLF
GFFGAIVIVLGSIWIFAAHYHHGDHMDGNPPGGAEHSEHSGHNE

Sequences:

>Translated_124_residues
MANKSAEHSHFPWKHIVGFILSIVLTLLALWVAVYTDLSSSAKLWIIFGFAFIQAALQLLMFMHMTESENGTIQVGNTLF
GFFGAIVIVLGSIWIFAAHYHHGDHMDGNPPGGAEHSEHSGHNE
>Mature_123_residues
ANKSAEHSHFPWKHIVGFILSIVLTLLALWVAVYTDLSSSAKLWIIFGFAFIQAALQLLMFMHMTESENGTIQVGNTLFG
FFGAIVIVLGSIWIFAAHYHHGDHMDGNPPGGAEHSEHSGHNE

Specific function: Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Major component for energy conversion during vegetative growth [H]

COG id: COG3125

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 4

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit 4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.-

Molecular weight: Translated: 13687; Mature: 13556

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKSAEHSHFPWKHIVGFILSIVLTLLALWVAVYTDLSSSAKLWIIFGFAFIQAALQLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MFMHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFAAHYHHGDHMDGNPPGGAEHSEHS
HHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GHNE
CCCC
>Mature Secondary Structure 
ANKSAEHSHFPWKHIVGFILSIVLTLLALWVAVYTDLSSSAKLWIIFGFAFIQAALQLL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
MFMHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFAAHYHHGDHMDGNPPGGAEHSEHS
HHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GHNE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7575098 [H]