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The map label for this gene is rapD

Identifier: 16080691

GI number: 16080691

Start: 3744349

End: 3745413

Strand: Direct

Name: rapD

Synonym: BSU36380

Alternate gene names: 16080691

Gene position: 3744349-3745413 (Clockwise)

Preceding gene: 16080688

Following gene: 16080697

Centisome position: 88.82

GC content: 38.12

Gene sequence:

>1065_bases
ATGATTTCGAAGTTTATTGAAAAAAGAATGCTAAACATGTTAGACGAGTGGTATTCCGCAATGAGCAAACGCAAAATGAA
TCACGTTTGCACACTGAAAGAGAAAATTGATCAGCACCTTCCAAAGATCAAAAAGAACACAAAACTTTGGATGCGTTATC
AATTGTTTCAGGCCCGCCATCAGCTGCTTTTTGAAAACCAGAACGGACTCGATTCATTGTTCGATGGCCTATATGGCCTG
GAAGACAAAATGGATGATGAATTGAAATATTATCTGTATTTTTTCTCTGGGTTATATGAGATGGTAAAAACAGCTCCGAA
ACATGCAGTACATCATTTTAAAAAAGCTGAACAGTACCTGGCCGCCATTCACAATACGTTTGAAGCCGCTGATTTATATT
ATCAAACCGCCGGCGCCTATTACTTGATGAAATCACCGCCGCTTTCCGTCCAATACGTCAAAAAAGCATTACACATCTAT
TTGCACCAATTCGGCTATATCAAAAAGGTAATCACCTGTAAACTTTTGCTCGCCGTGAATTATATTGATCAAGAACGCTA
TGAAAAAGCTGAACAGCTTTTCAAAGAAATCATTAAGAAAACCCAGCAACTACATGACGAAAACCTGCTATGCCACGCTT
ATTATAACCTTGGCTTTTTAAAAGCGACCGAGAAAAAAGACCAGGAAGCGCTTCTTTACTTTAGAAAAGTATTAAAGAAT
CAAGAATTTGAAATGAATTCACCAGTCTCATATCTTCATTGTGTGTACGAGTCTGTCAGAGCGCTTTTTAAAACAGGGAA
CATCACAGAAGCTAAAGCCGTCCTTCAAAAAGGAAAAGAATTATCTGAAAAGGTAGACATTCAAACCATTTATTTAAAAT
TAAAAACGCTTGAAGCCCTCTACACATCAGCCGAAGACCCTTATGAGCAGCTGCTCGAATATGTGCTTGAATTAGAAAAA
ATCGAGGCGTGGGTGGATTTAGAAGTGCTGTTAGAAGATATTACGGAATACTACAAAAAAAAGGACGATTTCGAAAAAGC
CGCTTTTTTTATCATGCGCGGCTGA

Upstream 100 bases:

>100_bases
CTTTTTCAACCGCGCTAAAATGTAACCAACTGTCAATGAGAGCCGTCAAAAGTTATGATATGATAATTATAGATTTTACC
AATAGCAAAGAGGTAGGAAA

Downstream 100 bases:

>100_bases
TTGAAAAACGCCCATTTTCTTATTATCTGACTGAATTGATTAAACCGAGCATTTGATCTCCCATTGTGATCGTTCTGCTG
TTCAGCTGATATGAACGCTG

Product: response regulator aspartate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLWMRYQLFQARHQLLFENQNGLDSLFDGLYGL
EDKMDDELKYYLYFFSGLYEMVKTAPKHAVHHFKKAEQYLAAIHNTFEAADLYYQTAGAYYLMKSPPLSVQYVKKALHIY
LHQFGYIKKVITCKLLLAVNYIDQERYEKAEQLFKEIIKKTQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKN
QEFEMNSPVSYLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKLKTLEALYTSAEDPYEQLLEYVLELEK
IEAWVDLEVLLEDITEYYKKKDDFEKAAFFIMRG

Sequences:

>Translated_354_residues
MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLWMRYQLFQARHQLLFENQNGLDSLFDGLYGL
EDKMDDELKYYLYFFSGLYEMVKTAPKHAVHHFKKAEQYLAAIHNTFEAADLYYQTAGAYYLMKSPPLSVQYVKKALHIY
LHQFGYIKKVITCKLLLAVNYIDQERYEKAEQLFKEIIKKTQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKN
QEFEMNSPVSYLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKLKTLEALYTSAEDPYEQLLEYVLELEK
IEAWVDLEVLLEDITEYYKKKDDFEKAAFFIMRG
>Mature_354_residues
MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLWMRYQLFQARHQLLFENQNGLDSLFDGLYGL
EDKMDDELKYYLYFFSGLYEMVKTAPKHAVHHFKKAEQYLAAIHNTFEAADLYYQTAGAYYLMKSPPLSVQYVKKALHIY
LHQFGYIKKVITCKLLLAVNYIDQERYEKAEQLFKEIIKKTQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKN
QEFEMNSPVSYLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKLKTLEALYTSAEDPYEQLLEYVLELEK
IEAWVDLEVLLEDITEYYKKKDDFEKAAFFIMRG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RAPD_BACSU (P94583)

Other databases:

- EMBL:   Z83337
- EMBL:   AL009126
- PIR:   G69688
- RefSeq:   NP_391519.1
- ProteinModelPortal:   P94583
- SMR:   P94583
- EnsemblBacteria:   EBBACT00000002317
- GeneID:   936919
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36380
- NMPDR:   fig|224308.1.peg.3645
- GenoList:   BSU36380
- GeneTree:   EBGT00070000031735
- HOGENOM:   HBG338399
- OMA:   AAFFIMR
- ProtClustDB:   CLSK888020
- BioCyc:   BSUB:BSU36380-MONOMER
- GO:   GO:0005488
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- Gene3D:   G3DSA:1.25.40.10
- SMART:   SM00028

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42135; Mature: 42135

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: PS50005 TPR; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLWMRYQLFQARH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QLLFENQNGLDSLFDGLYGLEDKMDDELKYYLYFFSGLYEMVKTAPKHAVHHFKKAEQYL
HHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIHNTFEAADLYYQTAGAYYLMKSPPLSVQYVKKALHIYLHQFGYIKKVITCKLLLAVN
HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIDQERYEKAEQLFKEIIKKTQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHEECCCCCHHHHHHHHHHHHCC
QEFEMNSPVSYLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKLKTLEAL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
YTSAEDPYEQLLEYVLELEKIEAWVDLEVLLEDITEYYKKKDDFEKAAFFIMRG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MISKFIEKRMLNMLDEWYSAMSKRKMNHVCTLKEKIDQHLPKIKKNTKLWMRYQLFQARH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QLLFENQNGLDSLFDGLYGLEDKMDDELKYYLYFFSGLYEMVKTAPKHAVHHFKKAEQYL
HHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIHNTFEAADLYYQTAGAYYLMKSPPLSVQYVKKALHIYLHQFGYIKKVITCKLLLAVN
HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIDQERYEKAEQLFKEIIKKTQQLHDENLLCHAYYNLGFLKATEKKDQEALLYFRKVLKN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHEECCCCCHHHHHHHHHHHHCC
QEFEMNSPVSYLHCVYESVRALFKTGNITEAKAVLQKGKELSEKVDIQTIYLKLKTLEAL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
YTSAEDPYEQLLEYVLELEKIEAWVDLEVLLEDITEYYKKKDDFEKAAFFIMRG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377