Click here to switch to the map view.

The map label for this gene is ywoH

Identifier: 16080697

GI number: 16080697

Start: 3749052

End: 3749465

Strand: Direct

Name: ywoH

Synonym: BSU36440

Alternate gene names: 16080697

Gene position: 3749052-3749465 (Clockwise)

Preceding gene: 16080691

Following gene: 16080698

Centisome position: 88.93

GC content: 43.0

Gene sequence:

>414_bases
ATGTCCTACGTCAACAGACACCTCATTCATCAAATCAACCAAAGCGCCCGCCTGATTGCCAAGAAAGCCAATGAACAGCT
AGAGCCATTCGGCCTTTATTCATCTCAATGGTCAGTTTTATATTGTTTGCGTACGATCGGACCAATGACTCAAAAAGAGA
TTTGGTCCTATTTAAATGTGGAAGCGCCGACTGTGACTCGGACGATCAAACGCCTGGAGGAGAACGGCTGGGTTCAGAGA
CGGCAAGGTGAAGACAAACGGGAAAAACTTGTTGTCCTCACAAAAGAAGCCGAGAAAAAATACGAAGAAATCAATGTGAA
AATGTTGAAATTCGAGGAAGAGCTGCTTGCAGATTTCCGGGATGAAGATAAAGAAGCTTTTTCTCATTTATTCCGCATGT
TTTTACAACAATGA

Upstream 100 bases:

>100_bases
TTTCGCGTCACTAAATTTTCATCTTTACAACTATTGATCGCTCCTGTAAAATGAAATAAGCAATTAGTTACTTAGGTAAG
TTTTTTAGAAGGAGACCGAC

Downstream 100 bases:

>100_bases
AAATAAGGAAGTGACATACATTTGAAAAAAGCGGATGCGATATGGACCAAGGATTTTATTATGGTCCTGCTTGTCAATTT
ATTTGTGTTTGTGTTCTTTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSYVNRHLIHQINQSARLIAKKANEQLEPFGLYSSQWSVLYCLRTIGPMTQKEIWSYLNVEAPTVTRTIKRLEENGWVQR
RQGEDKREKLVVLTKEAEKKYEEINVKMLKFEEELLADFRDEDKEAFSHLFRMFLQQ

Sequences:

>Translated_137_residues
MSYVNRHLIHQINQSARLIAKKANEQLEPFGLYSSQWSVLYCLRTIGPMTQKEIWSYLNVEAPTVTRTIKRLEENGWVQR
RQGEDKREKLVVLTKEAEKKYEEINVKMLKFEEELLADFRDEDKEAFSHLFRMFLQQ
>Mature_136_residues
SYVNRHLIHQINQSARLIAKKANEQLEPFGLYSSQWSVLYCLRTIGPMTQKEIWSYLNVEAPTVTRTIKRLEENGWVQRR
QGEDKREKLVVLTKEAEKKYEEINVKMLKFEEELLADFRDEDKEAFSHLFRMFLQQ

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWOH_BACSU (P94578)

Other databases:

- EMBL:   Z82987
- EMBL:   AL009126
- PIR:   C70065
- RefSeq:   NP_391525.1
- ProteinModelPortal:   P94578
- SMR:   P94578
- EnsemblBacteria:   EBBACT00000002149
- GeneID:   936923
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU36440
- NMPDR:   fig|224308.1.peg.3651
- GenoList:   BSU36440
- GeneTree:   EBGT00050000001095
- HOGENOM:   HBG337803
- OMA:   SELCKNI
- PhylomeDB:   P94578
- ProtClustDB:   CLSK888022
- BioCyc:   BSUB:BSU36440-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000835
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00598
- SMART:   SM00347

Pfam domain/function: PF01047 MarR

EC number: NA

Molecular weight: Translated: 16424; Mature: 16293

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS01117 HTH_MARR_1; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVNRHLIHQINQSARLIAKKANEQLEPFGLYSSQWSVLYCLRTIGPMTQKEIWSYLNV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
EAPTVTRTIKRLEENGWVQRRQGEDKREKLVVLTKEAEKKYEEINVKMLKFEEELLADFR
CCHHHHHHHHHHHHCCCEECCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
DEDKEAFSHLFRMFLQQ
CCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYVNRHLIHQINQSARLIAKKANEQLEPFGLYSSQWSVLYCLRTIGPMTQKEIWSYLNV
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
EAPTVTRTIKRLEENGWVQRRQGEDKREKLVVLTKEAEKKYEEINVKMLKFEEELLADFR
CCHHHHHHHHHHHHCCCEECCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
DEDKEAFSHLFRMFLQQ
CCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377