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The map label for this gene is yvlD

Identifier: 16080563

GI number: 16080563

Start: 3606762

End: 3607121

Strand: Reverse

Name: yvlD

Synonym: BSU35100

Alternate gene names: 16080563

Gene position: 3607121-3606762 (Counterclockwise)

Preceding gene: 16080564

Following gene: 16080560

Centisome position: 85.57

GC content: 42.5

Gene sequence:

>360_bases
ATGGTAAAATGGGCAGTCAGCATTTTAGTCAATGCATTGTTATTAATCGTCATTGATGGATATATTGACTCCATCCATAT
CAGCAGCATTGGGGCAGCGATTATCGCCAGCCTCATTTTATCGATCTTAAACGTGCTGATTAAACCGCTTTTAATTATAT
TTACACTGCCGGTCACCATGGTGACGCTTGGACTCTTCTTGTTTGTGATTAACGCCATCACGCTTATGATGACCGCGTCC
ATTATGGGTGACAGCTTTCAAATCGACGGCTTCGGCACAGCGATATGGGCATCCGTTATCCTGTCGGTCTTCCATTTGCT
GATTCAAAAAGGCATTTTAGAGCCGCTTAGAAAAAAATAA

Upstream 100 bases:

>100_bases
ATAACTGTCATCTTAGCCATTATGACAAGTGTCTTGCCGGTTTTGCTCATTTATATCATTTGGATTTTTATCGTCCCGTC
AGAAAGGGATATGAAATGAC

Downstream 100 bases:

>100_bases
AAAAAGCTGCCCGCAAAGGCAGCTTTTTTACATGTGGTGCTTTTTTTGTTTCGTGCGCTTCTGCGGCGAAAACATTGGCG
GAAGAAGGCAAAAGCTCAAT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MVKWAVSILVNALLLIVIDGYIDSIHISSIGAAIIASLILSILNVLIKPLLIIFTLPVTMVTLGLFLFVINAITLMMTAS
IMGDSFQIDGFGTAIWASVILSVFHLLIQKGILEPLRKK

Sequences:

>Translated_119_residues
MVKWAVSILVNALLLIVIDGYIDSIHISSIGAAIIASLILSILNVLIKPLLIIFTLPVTMVTLGLFLFVINAITLMMTAS
IMGDSFQIDGFGTAIWASVILSVFHLLIQKGILEPLRKK
>Mature_119_residues
MVKWAVSILVNALLLIVIDGYIDSIHISSIGAAIIASLILSILNVLIKPLLIIFTLPVTMVTLGLFLFVINAITLMMTAS
IMGDSFQIDGFGTAIWASVILSVFHLLIQKGILEPLRKK

Specific function: Unknown

COG id: COG1950

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVLD_BACSU (O34648)

Other databases:

- EMBL:   AF017113
- EMBL:   AL009126
- PIR:   F70043
- RefSeq:   NP_391390.1
- ProteinModelPortal:   O34648
- EnsemblBacteria:   EBBACT00000001435
- GeneID:   936638
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35100
- NMPDR:   fig|224308.1.peg.3516
- GenoList:   BSU35100
- GeneTree:   EBGT00050000003007
- HOGENOM:   HBG710501
- OMA:   ITLMMTA
- ProtClustDB:   CLSK887941
- BioCyc:   BSUB:BSU35100-MONOMER
- InterPro:   IPR007165

Pfam domain/function: PF04020 DUF360

EC number: NA

Molecular weight: Translated: 12904; Mature: 12904

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1260e7d0)-; HASH(0x12761b84)-; HASH(0xe726730)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKWAVSILVNALLLIVIDGYIDSIHISSIGAAIIASLILSILNVLIKPLLIIFTLPVTM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTLGLFLFVINAITLMMTASIMGDSFQIDGFGTAIWASVILSVFHLLIQKGILEPLRKK
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MVKWAVSILVNALLLIVIDGYIDSIHISSIGAAIIASLILSILNVLIKPLLIIFTLPVTM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTLGLFLFVINAITLMMTASIMGDSFQIDGFGTAIWASVILSVFHLLIQKGILEPLRKK
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377