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The map label for this gene is yvlC

Identifier: 16080564

GI number: 16080564

Start: 3607123

End: 3607320

Strand: Reverse

Name: yvlC

Synonym: BSU35110

Alternate gene names: 16080564

Gene position: 3607320-3607123 (Counterclockwise)

Preceding gene: 16080565

Following gene: 16080563

Centisome position: 85.57

GC content: 39.39

Gene sequence:

>198_bases
ATGAATAAGCTTTATCGCTCAGAAAAAAATAAGAAAATCGCCGGTGTTATCGGAGGTCTCGCGGAATATTTCAATTGGGA
CGCATCACTCCTCAGAGTCATAACTGTCATCTTAGCCATTATGACAAGTGTCTTGCCGGTTTTGCTCATTTATATCATTT
GGATTTTTATCGTCCCGTCAGAAAGGGATATGAAATGA

Upstream 100 bases:

>100_bases
ATGATGTTCACTTCAAATCAGGCACATGATCAAAACATCACCGTCTTCTCAGAATCACTAACAGGCGCCATCAAACTAAA
GTACTCACAGAGGTGATCGA

Downstream 100 bases:

>100_bases
CATGGTAAAATGGGCAGTCAGCATTTTAGTCAATGCATTGTTATTAATCGTCATTGATGGATATATTGACTCCATCCATA
TCAGCAGCATTGGGGCAGCG

Product: regulator (stress mediated)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNKLYRSEKNKKIAGVIGGLAEYFNWDASLLRVITVILAIMTSVLPVLLIYIIWIFIVPSERDMK

Sequences:

>Translated_65_residues
MNKLYRSEKNKKIAGVIGGLAEYFNWDASLLRVITVILAIMTSVLPVLLIYIIWIFIVPSERDMK
>Mature_65_residues
MNKLYRSEKNKKIAGVIGGLAEYFNWDASLLRVITVILAIMTSVLPVLLIYIIWIFIVPSERDMK

Specific function: Unknown

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVLC_BACSU (O34719)

Other databases:

- EMBL:   AF017113
- EMBL:   AL009126
- PIR:   E70043
- RefSeq:   NP_391391.1
- EnsemblBacteria:   EBBACT00000001656
- GeneID:   936642
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35110
- NMPDR:   fig|224308.1.peg.3517
- GenoList:   BSU35110
- GeneTree:   EBGT00050000002290
- HOGENOM:   HBG697525
- OMA:   MIVVYII
- ProtClustDB:   CLSK887942
- BioCyc:   BSUB:BSU35110-MONOMER
- InterPro:   IPR007168

Pfam domain/function: PF04024 PspC

EC number: NA

Molecular weight: Translated: 7469; Mature: 7469

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x125b2c50)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLYRSEKNKKIAGVIGGLAEYFNWDASLLRVITVILAIMTSVLPVLLIYIIWIFIVPS
CCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERDMK
CCCCH
>Mature Secondary Structure
MNKLYRSEKNKKIAGVIGGLAEYFNWDASLLRVITVILAIMTSVLPVLLIYIIWIFIVPS
CCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ERDMK
CCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377