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The map label for this gene is yvmC

Identifier: 16080560

GI number: 16080560

Start: 3603821

End: 3604567

Strand: Reverse

Name: yvmC

Synonym: BSU35070

Alternate gene names: 16080560

Gene position: 3604567-3603821 (Counterclockwise)

Preceding gene: 16080563

Following gene: 16080559

Centisome position: 85.51

GC content: 44.58

Gene sequence:

>747_bases
ATGACCGGAATGGTAACGGAAAGAAGGTCTGTGCATTTTATTGCTGAGGCATTAACAGAAAACTGCAGAGAAATATTTGA
ACGGCGCAGGCATGTTTTGGTGGGGATCAGCCCATTTAACAGCAGGTTTTCAGAGGATTATATTTACAGATTAATTGGAT
GGGCGAAAGCTCAATTTAAAAGCGTTTCAGTTTTACTTGCAGGGCATGAGGCGGCTAATCTTCTAGAAGCGCTTGGAACT
CCGAGAGGAAAGGCTGAACGAAAAGTAAGGAAAGAGGTATCACGAAACAGGAGATTTGCAGAAAGAGCCCTTGTGGCTCA
TGGCGGGGATCCGAAGGCGATTCATACATTTTCTGATTTTATAGATAACAAAGCCTACCAGCTGTTGAGACAAGAAGTTG
AACATGCATTTTTTGAGCAGCCTCATTTTCGACATGCTTGTTTGGACATGTCTCGTGAAGCGATAATCGGGCGTGCGCGG
GGCGTCAGTTTGATGATGGAAGAAGTCAGTGAGGATATGCTGAATTTGGCTGTGGAATATGTCATAGCTGAGCTGCCGTT
TTTTATCGGAGCTCCGGATATTTTAGAGGTGGAAGAGACACTCCTTGCTTATCATCGTCCGTGGAAGCTGGGTGAGAAGA
TCAGTAACCATGAATTTTCTATTTGTATGCGGCCGAATCAAGGGTATCTCATTGTACAGGAAATGGCGCAGATGCTTTCT
GAGAAACGGATCACATCTGAAGGATGA

Upstream 100 bases:

>100_bases
AAGTGATGCCTGCCATTCGTCTTGTTCAGTTGTTCTAGCTATTCCATCTTGTATTTGAGGGTGATGACTTAAAGCGGGAT
AAGTTTTAGGGGTGAATGAG

Downstream 100 bases:

>100_bases
TAGGGGGAGTAAAACATGAGCCAATCGATTAAATTGTTTAGTGTGCTTTCTGATCAATTTCAAAACAATCCATATGCTTA
TTTTTCACAACTGCGGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTGMVTERRSVHFIAEALTENCREIFERRRHVLVGISPFNSRFSEDYIYRLIGWAKAQFKSVSVLLAGHEAANLLEALGT
PRGKAERKVRKEVSRNRRFAERALVAHGGDPKAIHTFSDFIDNKAYQLLRQEVEHAFFEQPHFRHACLDMSREAIIGRAR
GVSLMMEEVSEDMLNLAVEYVIAELPFFIGAPDILEVEETLLAYHRPWKLGEKISNHEFSICMRPNQGYLIVQEMAQMLS
EKRITSEG

Sequences:

>Translated_248_residues
MTGMVTERRSVHFIAEALTENCREIFERRRHVLVGISPFNSRFSEDYIYRLIGWAKAQFKSVSVLLAGHEAANLLEALGT
PRGKAERKVRKEVSRNRRFAERALVAHGGDPKAIHTFSDFIDNKAYQLLRQEVEHAFFEQPHFRHACLDMSREAIIGRAR
GVSLMMEEVSEDMLNLAVEYVIAELPFFIGAPDILEVEETLLAYHRPWKLGEKISNHEFSICMRPNQGYLIVQEMAQMLS
EKRITSEG
>Mature_247_residues
TGMVTERRSVHFIAEALTENCREIFERRRHVLVGISPFNSRFSEDYIYRLIGWAKAQFKSVSVLLAGHEAANLLEALGTP
RGKAERKVRKEVSRNRRFAERALVAHGGDPKAIHTFSDFIDNKAYQLLRQEVEHAFFEQPHFRHACLDMSREAIIGRARG
VSLMMEEVSEDMLNLAVEYVIAELPFFIGAPDILEVEETLLAYHRPWKLGEKISNHEFSICMRPNQGYLIVQEMAQMLSE
KRITSEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVMC_BACSU (O34351)

Other databases:

- EMBL:   AF017113
- EMBL:   AL009126
- PIR:   A70044
- RefSeq:   NP_391387.1
- ProteinModelPortal:   O34351
- SMR:   O34351
- EnsemblBacteria:   EBBACT00000002319
- GeneID:   936633
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU35070
- NMPDR:   fig|224308.1.peg.3513
- GenoList:   BSU35070
- GeneTree:   EBGT00050000006369
- HOGENOM:   HBG694775
- OMA:   PFNSRFS
- ProtClustDB:   CLSK514417
- BioCyc:   BSUB:BSU35070-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28507; Mature: 28376

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGMVTERRSVHFIAEALTENCREIFERRRHVLVGISPFNSRFSEDYIYRLIGWAKAQFK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
SVSVLLAGHEAANLLEALGTPRGKAERKVRKEVSRNRRFAERALVAHGGDPKAIHTFSDF
HHHHEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IDNKAYQLLRQEVEHAFFEQPHFRHACLDMSREAIIGRARGVSLMMEEVSEDMLNLAVEY
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIAELPFFIGAPDILEVEETLLAYHRPWKLGEKISNHEFSICMRPNQGYLIVQEMAQMLS
HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHH
EKRITSEG
HHCCCCCC
>Mature Secondary Structure 
TGMVTERRSVHFIAEALTENCREIFERRRHVLVGISPFNSRFSEDYIYRLIGWAKAQFK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
SVSVLLAGHEAANLLEALGTPRGKAERKVRKEVSRNRRFAERALVAHGGDPKAIHTFSDF
HHHHEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
IDNKAYQLLRQEVEHAFFEQPHFRHACLDMSREAIIGRARGVSLMMEEVSEDMLNLAVEY
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIAELPFFIGAPDILEVEETLLAYHRPWKLGEKISNHEFSICMRPNQGYLIVQEMAQMLS
HHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHH
EKRITSEG
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377