Click here to switch to the map view.

The map label for this gene is ytfJ

Identifier: 16080002

GI number: 16080002

Start: 3018309

End: 3018764

Strand: Reverse

Name: ytfJ

Synonym: BSU29500

Alternate gene names: 16080002

Gene position: 3018764-3018309 (Counterclockwise)

Preceding gene: 16080003

Following gene: 16080001

Centisome position: 71.61

GC content: 43.42

Gene sequence:

>456_bases
ATGGCAGACCATCCCATCCAAGGTTTAATGAAAACCGCAATGGAAAACTTGAAGGAAATGATTGATGTTAACACCATCAT
CGGAGATCCAGTGGAAACGCCTGATGGAAGTGTGATTTTAACTGTTTCTAAAGTTGGATTCGGATTCGCCGCAGGCGGAA
GCGAGTTTGGCGGAAAGCCGGCCGAAAAGAAATCGGAAGACGATGAGACAAGAGAACAGAAACTTCCTTTCGGAGGCGGA
AGCGGGGGCGGTGTGTCCATTACGCCGATCGCGTTTTTAATTGTCGGATCGACAGGCATCAGAATGCTTCATTTAGATGA
AAATACCCATTTAATAGAGAAAATTTTAGACGCAGCCCCTCAAACACTCGAGCGCATCCAGCAAATGTTCAAGAAAAATA
ACAAAAACCAAAGCCAAGGCCAAAATCAAAACCAAATGAACAATATGAATTATTAA

Upstream 100 bases:

>100_bases
AAATTCGTCAAATACGGACGGGAGCTATCCGTATTAAAGAAGAATCCGTCGGCTAGAATGACTTCAAAGAATGATTCATC
AGTTTAAGGAGGAAGCGTAT

Downstream 100 bases:

>100_bases
AAAAAGGTTAACTGCGCTGGCCGCAGTTAACTTTTTTTTGGCATAAACTTTGCAGTTTGCAGGAAACTTTACTATGATAG
AGACATACATACAAAAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKPAEKKSEDDETREQKLPFGGG
SGGGVSITPIAFLIVGSTGIRMLHLDENTHLIEKILDAAPQTLERIQQMFKKNNKNQSQGQNQNQMNNMNY

Sequences:

>Translated_151_residues
MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKPAEKKSEDDETREQKLPFGGG
SGGGVSITPIAFLIVGSTGIRMLHLDENTHLIEKILDAAPQTLERIQQMFKKNNKNQSQGQNQNQMNNMNY
>Mature_150_residues
ADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKPAEKKSEDDETREQKLPFGGGS
GGGVSITPIAFLIVGSTGIRMLHLDENTHLIEKILDAAPQTLERIQQMFKKNNKNQSQGQNQNQMNNMNY

Specific function: Unknown

COG id: COG3874

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Spore core (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTFJ_BACSU (O34806)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   H69991
- RefSeq:   NP_390828.1
- ProteinModelPortal:   O34806
- EnsemblBacteria:   EBBACT00000000577
- GeneID:   937346
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29500
- NMPDR:   fig|224308.1.peg.2953
- GenoList:   BSU29500
- GeneTree:   EBGT00050000002717
- HOGENOM:   HBG304739
- OMA:   AMENLKQ
- ProtClustDB:   CLSK887721
- BioCyc:   BSUB:BSU29500-MONOMER
- InterPro:   IPR014229
- TIGRFAMs:   TIGR02874

Pfam domain/function: PF09579 Spore_YtfJ

EC number: NA

Molecular weight: Translated: 16347; Mature: 16216

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
AEKKSEDDETREQKLPFGGGSGGGVSITPIAFLIVGSTGIRMLHLDENTHLIEKILDAAP
CCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHCH
QTLERIQQMFKKNNKNQSQGQNQNQMNNMNY
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
ADHPIQGLMKTAMENLKEMIDVNTIIGDPVETPDGSVILTVSKVGFGFAAGGSEFGGKP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
AEKKSEDDETREQKLPFGGGSGGGVSITPIAFLIVGSTGIRMLHLDENTHLIEKILDAAP
CCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHCH
QTLERIQQMFKKNNKNQSQGQNQNQMNNMNY
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377