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The map label for this gene is ytfI

Identifier: 16080003

GI number: 16080003

Start: 3018778

End: 3019458

Strand: Reverse

Name: ytfI

Synonym: BSU29510

Alternate gene names: 16080003

Gene position: 3019458-3018778 (Counterclockwise)

Preceding gene: 16080004

Following gene: 16080002

Centisome position: 71.63

GC content: 42.14

Gene sequence:

>681_bases
ATGGTGTATGTACTGACAGCCATTCTTATTCTCATAGGGATCGTACTGCTTCTCAGAATGAAAATCCATGTCGCGCTGGA
GTATCTTCATGCCGATGATAATGACAAATTGACCTTGAAGATTACGGCGCTGTTTGGCCTTATAAGGATCAAAAAAACAA
TCCCGGCGATTAAGGTGAACAAAGAAGACGGAACAGTGGATATCAAACAAAAAACTGAATCCAAAATGAAAAAAAGCAGC
GGAAAGAAAAAAATTACACAAAACGATGTGCAGCAAAGCATTAATAAAATCGAAATGCTTTTGCATCAGGTCACCAGACT
GCGGAAAATCAGCGCGTCTTTTCTCGCGCATTTACATATCACAAAACTAGAATGGGTTACAGTAATCGGAATTCAGGACG
CGGCAGTGACAGGTGTGTTAACCGGTGCTGTATGGGGCGTGAAGGGCGGTATCGCAGCAATGCTCTACGACCACCTGGAC
TTTGTGAATAAACCTGTCTATGAGGTGATCCCGTCGTTTCAAGTCCCTGTTTCCAAGACCCATTTTCAGTGTATATTCTT
TTTTCGCTTTGGACATGCTATGCTTGCAGCTTTCAAATTCGTCAAATACGGACGGGAGCTATCCGTATTAAAGAAGAATC
CGTCGGCTAGAATGACTTCAAAGAATGATTCATCAGTTTAA

Upstream 100 bases:

>100_bases
TGCATGAAAAATTATACCGCAAATAACCGATAACCCGGACTTCCGTCCGGGTTTATTTTTTTAGGAATTGGCGATAATGC
TCCTAGAGGAAGTGAAGAAT

Downstream 100 bases:

>100_bases
GGAGGAAGCGTATATGGCAGACCATCCCATCCAAGGTTTAATGAAAACCGCAATGGAAAACTTGAAGGAAATGATTGATG
TTAACACCATCATCGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MVYVLTAILILIGIVLLLRMKIHVALEYLHADDNDKLTLKITALFGLIRIKKTIPAIKVNKEDGTVDIKQKTESKMKKSS
GKKKITQNDVQQSINKIEMLLHQVTRLRKISASFLAHLHITKLEWVTVIGIQDAAVTGVLTGAVWGVKGGIAAMLYDHLD
FVNKPVYEVIPSFQVPVSKTHFQCIFFFRFGHAMLAAFKFVKYGRELSVLKKNPSARMTSKNDSSV

Sequences:

>Translated_226_residues
MVYVLTAILILIGIVLLLRMKIHVALEYLHADDNDKLTLKITALFGLIRIKKTIPAIKVNKEDGTVDIKQKTESKMKKSS
GKKKITQNDVQQSINKIEMLLHQVTRLRKISASFLAHLHITKLEWVTVIGIQDAAVTGVLTGAVWGVKGGIAAMLYDHLD
FVNKPVYEVIPSFQVPVSKTHFQCIFFFRFGHAMLAAFKFVKYGRELSVLKKNPSARMTSKNDSSV
>Mature_226_residues
MVYVLTAILILIGIVLLLRMKIHVALEYLHADDNDKLTLKITALFGLIRIKKTIPAIKVNKEDGTVDIKQKTESKMKKSS
GKKKITQNDVQQSINKIEMLLHQVTRLRKISASFLAHLHITKLEWVTVIGIQDAAVTGVLTGAVWGVKGGIAAMLYDHLD
FVNKPVYEVIPSFQVPVSKTHFQCIFFFRFGHAMLAAFKFVKYGRELSVLKKNPSARMTSKNDSSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTFI_BACSU (O34917)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   G69991
- RefSeq:   NP_390829.1
- ProteinModelPortal:   O34917
- EnsemblBacteria:   EBBACT00000000605
- GeneID:   937342
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29510
- NMPDR:   fig|224308.1.peg.2954
- GenoList:   BSU29510
- GeneTree:   EBGT00050000000848
- HOGENOM:   HBG338222
- OMA:   RIGHAML
- ProtClustDB:   CLSK887722
- BioCyc:   BSUB:BSU29510-MONOMER
- InterPro:   IPR021338

Pfam domain/function: PF11167 DUF2953

EC number: NA

Molecular weight: Translated: 25377; Mature: 25377

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYVLTAILILIGIVLLLRMKIHVALEYLHADDNDKLTLKITALFGLIRIKKTIPAIKVN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEE
KEDGTVDIKQKTESKMKKSSGKKKITQNDVQQSINKIEMLLHQVTRLRKISASFLAHLHI
CCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TKLEWVTVIGIQDAAVTGVLTGAVWGVKGGIAAMLYDHLDFVNKPVYEVIPSFQVPVSKT
EEEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
HFQCIFFFRFGHAMLAAFKFVKYGRELSVLKKNPSARMTSKNDSSV
HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MVYVLTAILILIGIVLLLRMKIHVALEYLHADDNDKLTLKITALFGLIRIKKTIPAIKVN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEE
KEDGTVDIKQKTESKMKKSSGKKKITQNDVQQSINKIEMLLHQVTRLRKISASFLAHLHI
CCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
TKLEWVTVIGIQDAAVTGVLTGAVWGVKGGIAAMLYDHLDFVNKPVYEVIPSFQVPVSKT
EEEEEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
HFQCIFFFRFGHAMLAAFKFVKYGRELSVLKKNPSARMTSKNDSSV
HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377