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The map label for this gene is ytnM

Identifier: 16079980

GI number: 16079980

Start: 2998796

End: 2999698

Strand: Reverse

Name: ytnM

Synonym: BSU29280

Alternate gene names: 16079980

Gene position: 2999698-2998796 (Counterclockwise)

Preceding gene: 16079981

Following gene: 16079979

Centisome position: 71.16

GC content: 44.52

Gene sequence:

>903_bases
ATGAAGAAATTAATCGTTTTTGCATTTATTGGTTTATTGTCGCAGTTAATAGACGGTTCGTTAGGTATGGCTTATGGGGT
TACCTCAACTTCTTTGTTATTGGCGTTTGGCATCACACCTGCTGTGGCTTCGGCTTCTGTCCATTTAGCGGAAGTCGTAA
CGACTGCCGCATCGGGAGTGTCGCATATTAAATTTGGCAATGTTGACAAACAAACCGTTTATCAGCTTGTCATTCCCGGC
TCTATAGGCGCTTTTTTAGGCGCGGCATTCCTCAGCCAATTACCTGGAGATGTGGCGAAACCCTATATTTCTTTGTTTTT
GCTCCTTCTGGGCGGATATGTATTGATCAGGTTTTTATTTCAATATAAGCCGGCTCTTGAGAAGAAGCATGTGCCGTTAA
ACCGAAAACAATCCATCCCATTGGGAGTGATCGCTGGTTTTGCAGATGCCACAGGCGGAGGCGGCTGGGGACCGGTGACC
ACTCCGATTTTATTATCCCGCAAAGGCTTGAGCCCGAGGAAAGTTGTCGGGACTGTAGACACAAGTGAATTTGCCATCGC
CGTATCTGCAACCGCCGGTTTTCTTATTTCATTAGGATGGGAGGACGTCAATTGGTTATGGGTGTTTTCACTAATGGCCG
GCGGAATTATCGCTGCCCCTATCGCAGCATGGCTGGTGCAGAAGTTTCATCCGCAATTGATGGGTGTGCTTGTAGGAGGA
TTTATTATTCTGGTAAATGCCAGAACATTAATAAATGAATGGATCGCAAACACAGCTGTTCATCCATTGATCTATACGGC
CATAGGGGCGATATGGCTATCCGCAGTTTTATTTGTTTTATCTAAAATAGGGAATCGAAATATTGTTAAGACAGCGGTTG
ATGTCCATTTAAAAGAAAAATAA

Upstream 100 bases:

>100_bases
AATTATCAAAGCCTCTTATTTTTTATATGAAAGCGCCAAGAGATTGTTAGATTCGAATGAAGAGTCAAAAATATCTGATT
GATATAGATGGGGTGTTCTG

Downstream 100 bases:

>100_bases
AGGTTTTTCCGCTTTACGATGTAAAAGGAATCACGTGGTCCTTGCGTTTGACTGGAACGAAATCAACGCTGTAAGAAGCC
GGTCGGGCTTCTTTTTTATT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKKLIVFAFIGLLSQLIDGSLGMAYGVTSTSLLLAFGITPAVASASVHLAEVVTTAASGVSHIKFGNVDKQTVYQLVIPG
SIGAFLGAAFLSQLPGDVAKPYISLFLLLLGGYVLIRFLFQYKPALEKKHVPLNRKQSIPLGVIAGFADATGGGGWGPVT
TPILLSRKGLSPRKVVGTVDTSEFAIAVSATAGFLISLGWEDVNWLWVFSLMAGGIIAAPIAAWLVQKFHPQLMGVLVGG
FIILVNARTLINEWIANTAVHPLIYTAIGAIWLSAVLFVLSKIGNRNIVKTAVDVHLKEK

Sequences:

>Translated_300_residues
MKKLIVFAFIGLLSQLIDGSLGMAYGVTSTSLLLAFGITPAVASASVHLAEVVTTAASGVSHIKFGNVDKQTVYQLVIPG
SIGAFLGAAFLSQLPGDVAKPYISLFLLLLGGYVLIRFLFQYKPALEKKHVPLNRKQSIPLGVIAGFADATGGGGWGPVT
TPILLSRKGLSPRKVVGTVDTSEFAIAVSATAGFLISLGWEDVNWLWVFSLMAGGIIAAPIAAWLVQKFHPQLMGVLVGG
FIILVNARTLINEWIANTAVHPLIYTAIGAIWLSAVLFVLSKIGNRNIVKTAVDVHLKEK
>Mature_300_residues
MKKLIVFAFIGLLSQLIDGSLGMAYGVTSTSLLLAFGITPAVASASVHLAEVVTTAASGVSHIKFGNVDKQTVYQLVIPG
SIGAFLGAAFLSQLPGDVAKPYISLFLLLLGGYVLIRFLFQYKPALEKKHVPLNRKQSIPLGVIAGFADATGGGGWGPVT
TPILLSRKGLSPRKVVGTVDTSEFAIAVSATAGFLISLGWEDVNWLWVFSLMAGGIIAAPIAAWLVQKFHPQLMGVLVGG
FIILVNARTLINEWIANTAVHPLIYTAIGAIWLSAVLFVLSKIGNRNIVKTAVDVHLKEK

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTNM_BACSU (O34430)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   F69997
- RefSeq:   NP_390806.1
- ProteinModelPortal:   O34430
- EnsemblBacteria:   EBBACT00000001552
- GeneID:   937366
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29280
- NMPDR:   fig|224308.1.peg.2931
- GenoList:   BSU29280
- GeneTree:   EBGT00050000001255
- HOGENOM:   HBG668662
- OMA:   GLIIFTN
- ProtClustDB:   CLSK2518260
- BioCyc:   BSUB:BSU29280-MONOMER
- InterPro:   IPR002781

Pfam domain/function: PF01925 DUF81

EC number: NA

Molecular weight: Translated: 31787; Mature: 31787

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1133fe2c)-; HASH(0x112e75ec)-; HASH(0x10d21020)-; HASH(0x114f813c)-; HASH(0x11406ed8)-; HASH(0x11486bc8)-; HASH(0x11909ddc)-; HASH(0x114a91cc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIVFAFIGLLSQLIDGSLGMAYGVTSTSLLLAFGITPAVASASVHLAEVVTTAASGV
CCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
SHIKFGNVDKQTVYQLVIPGSIGAFLGAAFLSQLPGDVAKPYISLFLLLLGGYVLIRFLF
CCCCCCCCCHHHHEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QYKPALEKKHVPLNRKQSIPLGVIAGFADATGGGGWGPVTTPILLSRKGLSPRKVVGTVD
HHCHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHEEEECC
TSEFAIAVSATAGFLISLGWEDVNWLWVFSLMAGGIIAAPIAAWLVQKFHPQLMGVLVGG
CCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIILVNARTLINEWIANTAVHPLIYTAIGAIWLSAVLFVLSKIGNRNIVKTAVDVHLKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHEEECCH
>Mature Secondary Structure
MKKLIVFAFIGLLSQLIDGSLGMAYGVTSTSLLLAFGITPAVASASVHLAEVVTTAASGV
CCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
SHIKFGNVDKQTVYQLVIPGSIGAFLGAAFLSQLPGDVAKPYISLFLLLLGGYVLIRFLF
CCCCCCCCCHHHHEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
QYKPALEKKHVPLNRKQSIPLGVIAGFADATGGGGWGPVTTPILLSRKGLSPRKVVGTVD
HHCHHHHHCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHCCCCCCCHHEEEECC
TSEFAIAVSATAGFLISLGWEDVNWLWVFSLMAGGIIAAPIAAWLVQKFHPQLMGVLVGG
CCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
FIILVNARTLINEWIANTAVHPLIYTAIGAIWLSAVLFVLSKIGNRNIVKTAVDVHLKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHEEECCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377