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The map label for this gene is ytoI

Identifier: 16079979

GI number: 16079979

Start: 2997301

End: 2998620

Strand: Reverse

Name: ytoI

Synonym: BSU29270

Alternate gene names: 16079979

Gene position: 2998620-2997301 (Counterclockwise)

Preceding gene: 16079980

Following gene: 16079977

Centisome position: 71.13

GC content: 46.14

Gene sequence:

>1320_bases
TTGGCAACGAAGCATGAACAAATTTTAACGTATATCGATTCACTGCCTGTCGGTGAAAAAATTTCTGTCCGAAGAATTGC
AAAGGAAATGAAAGTAAGCGAAGGAACCGCGTACAGAGCGATCAAGGAAGCAGAGAATAAAGGGTTTGTCAGCACGATTG
AACGTGTGGGCACAATCAGAATTGAACAAAAGAAAAAAGAGAACATTGAAAAGCTTACCTATGCAGAGGTTGTAAATGTT
ATAGACGGACAAGTGCTCGGAGGCAGGGCAGGGCTCCATAAGACATTGAATAAATTCGTCATCGGCGCGATGGAGCTTGA
CGCGATGATGCGTTACACCGCAGCGGGGAATCTTTTGATTGTCGGAAACAGAATCAATGCACACAGGCAGGCGCTTGAAG
CGGGCGCGGCCGTATTGGTGACCGGGGGCTTTAACACGGATGACAGCATTGTGCAGCTGGCAGATGAGCTTGAACTGCCG
ATTTTATCCACGAGCTATGACACCTTTACAGTTGCCGCGATGATTAACCGGGCAATATATGACCAGCTGATCAAAAAAGA
AATTGTTTTGGTGGAGGACATCCTAACACCTGCTGACCGCACGGTATATCTTTCGCCTAAGGATAAACTTGAAAAATGGT
ATGAGAAAAATTTTGAAACGGGGCACGGCCGCTTCCCGGTTGTCGACGATCAAATGAAAATCCATGGCATTCTGACATCA
AAAGATATTGCTGGCCATGACCGAAATGCATCTATAGAAAAAGTCATGACCAAAAATCCCGTCACGGTTATTGGGAAAAC
ATCTGTCGCTTCAGCTGCGCAAATGATGGTATGGGAAGGGATCGAAGTGCTTCCCGTCACTGACGGCCACCAAAAACTCA
TCGGCATGATCAGCCGCCAAGACGTATTGAAAGCTCTTCAAATGATTCAAAAGCAGCCGCAGGTCGGGGAGAAGCTTGAT
GATATCGTTTCAAGGGGGTTTAAAGATGAGGGTGATGATAAAGAAGATCAAACGGTTTACGAGTATGAAGTCACGCCGCA
AATGACAAATCAGCTTGGAACCATTTCTTATGGCGTATTTACGACCATTTTGACGCAAGCGGCAAACCGATTTTTGCGCT
CGAAAAAACGCGGCGAACTCGTCATAGAGAGCATCACCATCTTCTTTTTGAAGCCTGTGCAGATGGAATCAGTCATCGAA
GTCAAACCTCGCATCTTGGAGGCCGGCAGAAAGTTTGGGAAAATGGAAGTGGAAGTGCACAGCCAAGGTCATATCGTGTC
TAAAGCGATGCTGATGGTTCAGCTGATGGAAAGAAGCTAA

Upstream 100 bases:

>100_bases
AAGCCGGTCGGGCTTCTTTTTTATTTTCCAGCCTCATTGCGTATAAATCCTTTGAAACCTTATAATAAAAACAAGAAGAC
TGTCCTTAGAGGTGAAAGGC

Downstream 100 bases:

>100_bases
GGGACGTTCAGGCGCCCCTTACGCGTGATCTCTTTCAGCTTCTTTGGCGTGAAGGGGATTGTAATGCCTGAAGGCTTTAT
AACCTGCCCAAGCGCTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MATKHEQILTYIDSLPVGEKISVRRIAKEMKVSEGTAYRAIKEAENKGFVSTIERVGTIRIEQKKKENIEKLTYAEVVNV
IDGQVLGGRAGLHKTLNKFVIGAMELDAMMRYTAAGNLLIVGNRINAHRQALEAGAAVLVTGGFNTDDSIVQLADELELP
ILSTSYDTFTVAAMINRAIYDQLIKKEIVLVEDILTPADRTVYLSPKDKLEKWYEKNFETGHGRFPVVDDQMKIHGILTS
KDIAGHDRNASIEKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTDGHQKLIGMISRQDVLKALQMIQKQPQVGEKLD
DIVSRGFKDEGDDKEDQTVYEYEVTPQMTNQLGTISYGVFTTILTQAANRFLRSKKRGELVIESITIFFLKPVQMESVIE
VKPRILEAGRKFGKMEVEVHSQGHIVSKAMLMVQLMERS

Sequences:

>Translated_439_residues
MATKHEQILTYIDSLPVGEKISVRRIAKEMKVSEGTAYRAIKEAENKGFVSTIERVGTIRIEQKKKENIEKLTYAEVVNV
IDGQVLGGRAGLHKTLNKFVIGAMELDAMMRYTAAGNLLIVGNRINAHRQALEAGAAVLVTGGFNTDDSIVQLADELELP
ILSTSYDTFTVAAMINRAIYDQLIKKEIVLVEDILTPADRTVYLSPKDKLEKWYEKNFETGHGRFPVVDDQMKIHGILTS
KDIAGHDRNASIEKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTDGHQKLIGMISRQDVLKALQMIQKQPQVGEKLD
DIVSRGFKDEGDDKEDQTVYEYEVTPQMTNQLGTISYGVFTTILTQAANRFLRSKKRGELVIESITIFFLKPVQMESVIE
VKPRILEAGRKFGKMEVEVHSQGHIVSKAMLMVQLMERS
>Mature_438_residues
ATKHEQILTYIDSLPVGEKISVRRIAKEMKVSEGTAYRAIKEAENKGFVSTIERVGTIRIEQKKKENIEKLTYAEVVNVI
DGQVLGGRAGLHKTLNKFVIGAMELDAMMRYTAAGNLLIVGNRINAHRQALEAGAAVLVTGGFNTDDSIVQLADELELPI
LSTSYDTFTVAAMINRAIYDQLIKKEIVLVEDILTPADRTVYLSPKDKLEKWYEKNFETGHGRFPVVDDQMKIHGILTSK
DIAGHDRNASIEKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTDGHQKLIGMISRQDVLKALQMIQKQPQVGEKLDD
IVSRGFKDEGDDKEDQTVYEYEVTPQMTNQLGTISYGVFTTILTQAANRFLRSKKRGELVIESITIFFLKPVQMESVIEV
KPRILEAGRKFGKMEVEVHSQGHIVSKAMLMVQLMERS

Specific function: Unknown

COG id: COG4109

COG function: function code K; Predicted transcriptional regulator containing CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTOI_BACSU (O34921)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   A69998
- RefSeq:   NP_390805.1
- ProteinModelPortal:   O34921
- EnsemblBacteria:   EBBACT00000003667
- GeneID:   935941
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29270
- NMPDR:   fig|224308.1.peg.2930
- GenoList:   BSU29270
- GeneTree:   EBGT00050000000997
- HOGENOM:   HBG314023
- OMA:   PIISTSY
- ProtClustDB:   CLSK873528
- BioCyc:   BSUB:BSU29270-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000644
- InterPro:   IPR010766
- InterPro:   IPR000524
- InterPro:   IPR006683
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- SMART:   SM00116

Pfam domain/function: PF03061 4HBT; PF00571 CBS; PF07085 DRTGG; PF00392 GntR

EC number: NA

Molecular weight: Translated: 49039; Mature: 48907

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS51371 CBS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKHEQILTYIDSLPVGEKISVRRIAKEMKVSEGTAYRAIKEAENKGFVSTIERVGTIR
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCEE
IEQKKKENIEKLTYAEVVNVIDGQVLGGRAGLHKTLNKFVIGAMELDAMMRYTAAGNLLI
EEHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VGNRINAHRQALEAGAAVLVTGGFNTDDSIVQLADELELPILSTSYDTFTVAAMINRAIY
ECCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH
DQLIKKEIVLVEDILTPADRTVYLSPKDKLEKWYEKNFETGHGRFPVVDDQMKIHGILTS
HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCEECCCEEEEEEEEC
KDIAGHDRNASIEKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTDGHQKLIGMISRQ
CCCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
DVLKALQMIQKQPQVGEKLDDIVSRGFKDEGDDKEDQTVYEYEVTPQMTNQLGTISYGVF
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHH
TTILTQAANRFLRSKKRGELVIESITIFFLKPVQMESVIEVKPRILEAGRKFGKMEVEVH
HHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEC
SQGHIVSKAMLMVQLMERS
CCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ATKHEQILTYIDSLPVGEKISVRRIAKEMKVSEGTAYRAIKEAENKGFVSTIERVGTIR
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCEE
IEQKKKENIEKLTYAEVVNVIDGQVLGGRAGLHKTLNKFVIGAMELDAMMRYTAAGNLLI
EEHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VGNRINAHRQALEAGAAVLVTGGFNTDDSIVQLADELELPILSTSYDTFTVAAMINRAIY
ECCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH
DQLIKKEIVLVEDILTPADRTVYLSPKDKLEKWYEKNFETGHGRFPVVDDQMKIHGILTS
HHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCEECCCEEEEEEEEC
KDIAGHDRNASIEKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTDGHQKLIGMISRQ
CCCCCCCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
DVLKALQMIQKQPQVGEKLDDIVSRGFKDEGDDKEDQTVYEYEVTPQMTNQLGTISYGVF
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHCCHHHHHHH
TTILTQAANRFLRSKKRGELVIESITIFFLKPVQMESVIEVKPRILEAGRKFGKMEVEVH
HHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEC
SQGHIVSKAMLMVQLMERS
CCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377