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The map label for this gene is etfB

Identifier: 16079905

GI number: 16079905

Start: 2916378

End: 2917151

Strand: Reverse

Name: etfB

Synonym: BSU28530

Alternate gene names: 16079905

Gene position: 2917151-2916378 (Counterclockwise)

Preceding gene: 16079906

Following gene: 16079904

Centisome position: 69.2

GC content: 46.77

Gene sequence:

>774_bases
ATGAATCTATTTGTACTGATGAAACGGACGTTTGACACAGAAGAAAAAATCGTCATTGAAACAGGAAAGATTCAGGATGA
CGGAGCGGAATGGATCATTAATCCATATGATGAGTACGCGATAGAAGAAGCCATCCAGCTGAAGGAAAAGCATGGCGGCA
CGATCACCGCTGTCACGGTCGGCGGTGAAGAAGCGGAGAAAGAATTGCGTACGGCGCTTGCCATGGGTTGTGACCAAGCT
GTTTTAATCAACATAGAAGATGATCTTGATGAACCCGACCAATATTCCATTTCTCAAGTTTTATACCACTATATGAAGGA
TCAGGAGTTTGATTTGATTCTCGGCGGAAATGTTGCCATTGACGGAGGATCAGGACAAGTGGCGCCTCGGCTTGCCGAGC
TACTGGACATTCCGTGTATCACTACGATCACCAAACTCGAAATCAACGGCACTGATGCAGAAGCAGAAAGGGACGTCGAA
GGGGATGTTGAAAAAATCAAAACGACGCTCCCATTGCTTGTCACAGCTCAGCAGGGCTTAAACGAGCCGCGCTATCCATC
GCTTCCGGGAATTATGAAGGCTAAGAAAAAGCCGCTTGAAGAGCTTGAACTTGATGATCTTGATCTGGACGAAGAGGATG
CTGAACCAAAGCTGAAAACCATTGAACGTTTTCTGCCGCCGAAAAAAGAAGCCGGGAAGCTTCTCCAAGGTGAGCCTGCT
GAACAGGCAAAAGAGCTTGTTTCATTGCTCCGCAGCGAAGCTAAAGTCATTTAA

Upstream 100 bases:

>100_bases
TTGGGGAAGCATTTGAGTCAGAGGACGCCAAGGAAGGCATCCAGGCATTTCTCGAAAAAAGAAAGCCTCAGTTCAAAGGC
GAATAAAAGGGGATATGATC

Downstream 100 bases:

>100_bases
AACTTGGACATTCAAAGAAACAGGGGGATGTTAGAATGGGAAAAAAAGTGATCGTGCTTGGAGAAATACGCGATGGGGAA
TTGCGAAATGTCACCTTTGA

Product: electron transfer flavoprotein beta subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNLFVLMKRTFDTEEKIVIETGKIQDDGAEWIINPYDEYAIEEAIQLKEKHGGTITAVTVGGEEAEKELRTALAMGCDQA
VLINIEDDLDEPDQYSISQVLYHYMKDQEFDLILGGNVAIDGGSGQVAPRLAELLDIPCITTITKLEINGTDAEAERDVE
GDVEKIKTTLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLDEEDAEPKLKTIERFLPPKKEAGKLLQGEPA
EQAKELVSLLRSEAKVI

Sequences:

>Translated_257_residues
MNLFVLMKRTFDTEEKIVIETGKIQDDGAEWIINPYDEYAIEEAIQLKEKHGGTITAVTVGGEEAEKELRTALAMGCDQA
VLINIEDDLDEPDQYSISQVLYHYMKDQEFDLILGGNVAIDGGSGQVAPRLAELLDIPCITTITKLEINGTDAEAERDVE
GDVEKIKTTLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLDEEDAEPKLKTIERFLPPKKEAGKLLQGEPA
EQAKELVSLLRSEAKVI
>Mature_257_residues
MNLFVLMKRTFDTEEKIVIETGKIQDDGAEWIINPYDEYAIEEAIQLKEKHGGTITAVTVGGEEAEKELRTALAMGCDQA
VLINIEDDLDEPDQYSISQVLYHYMKDQEFDLILGGNVAIDGGSGQVAPRLAELLDIPCITTITKLEINGTDAEAERDVE
GDVEKIKTTLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLDEEDAEPKLKTIERFLPPKKEAGKLLQGEPA
EQAKELVSLLRSEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase)

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family

Homologues:

Organism=Homo sapiens, GI4503609, Length=236, Percent_Identity=34.3220338983051, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI62420877, Length=208, Percent_Identity=36.0576923076923, Blast_Score=120, Evalue=1e-27,
Organism=Escherichia coli, GI87081682, Length=224, Percent_Identity=27.6785714285714, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI2367123, Length=232, Percent_Identity=26.2931034482759, Blast_Score=75, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25141345, Length=249, Percent_Identity=36.144578313253, Blast_Score=147, Evalue=5e-36,
Organism=Saccharomyces cerevisiae, GI6321646, Length=241, Percent_Identity=34.8547717842324, Blast_Score=116, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24651147, Length=237, Percent_Identity=36.7088607594937, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24651145, Length=237, Percent_Identity=36.7088607594937, Blast_Score=118, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ETFB_BACSU (P94550)

Other databases:

- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   E69620
- RefSeq:   NP_390731.1
- ProteinModelPortal:   P94550
- SMR:   P94550
- EnsemblBacteria:   EBBACT00000003108
- GeneID:   937962
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28530
- NMPDR:   fig|224308.1.peg.2856
- GenoList:   BSU28530
- GeneTree:   EBGT00050000003009
- HOGENOM:   HBG716515
- OMA:   THELARI
- PhylomeDB:   P94550
- ProtClustDB:   CLSK873506
- BioCyc:   BSUB:BSU28530-MONOMER
- GO:   GO:0006810
- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729
- Gene3D:   G3DSA:3.40.50.620
- PANTHER:   PTHR21294
- PIRSF:   PIRSF000090
- SMART:   SM00893

Pfam domain/function: PF01012 ETF

EC number: NA

Molecular weight: Translated: 28518; Mature: 28518

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFVLMKRTFDTEEKIVIETGKIQDDGAEWIINPYDEYAIEEAIQLKEKHGGTITAVTV
CCEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEEE
GGEEAEKELRTALAMGCDQAVLINIEDDLDEPDQYSISQVLYHYMKDQEFDLILGGNVAI
CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEE
DGGSGQVAPRLAELLDIPCITTITKLEINGTDAEAERDVEGDVEKIKTTLPLLVTAQQGL
ECCCCCHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEHHHCC
NEPRYPSLPGIMKAKKKPLEELELDDLDLDEEDAEPKLKTIERFLPPKKEAGKLLQGEPA
CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCH
EQAKELVSLLRSEAKVI
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNLFVLMKRTFDTEEKIVIETGKIQDDGAEWIINPYDEYAIEEAIQLKEKHGGTITAVTV
CCEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCEEEEEEE
GGEEAEKELRTALAMGCDQAVLINIEDDLDEPDQYSISQVLYHYMKDQEFDLILGGNVAI
CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCEEEE
DGGSGQVAPRLAELLDIPCITTITKLEINGTDAEAERDVEGDVEKIKTTLPLLVTAQQGL
ECCCCCHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHEEEHHHCC
NEPRYPSLPGIMKAKKKPLEELELDDLDLDEEDAEPKLKTIERFLPPKKEAGKLLQGEPA
CCCCCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCH
EQAKELVSLLRSEAKVI
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377