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The map label for this gene is yrvC

Identifier: 16079818

GI number: 16079818

Start: 2826245

End: 2826742

Strand: Reverse

Name: yrvC

Synonym: BSU27640

Alternate gene names: 16079818

Gene position: 2826742-2826245 (Counterclockwise)

Preceding gene: 16081162

Following gene: 16079817

Centisome position: 67.05

GC content: 44.18

Gene sequence:

>498_bases
ATGAGGGTTCGCGAATCAGAGCTGCCGGGCATAGGACAAAAAGTTGAAATGATTACTAGAAACCGTGATAAAATTTCAAT
TATCATTCATCATGACGGACGGAGAGAGCTTTACTATTTTGACGAAAACGACCATGAGGAATGTGTTGCCTCCGTGCAGT
TTGATGACGCTGAAGCAAGGCAAATGTCTGCAATTCTTGGCGGAATGGCATATAAACCGAAAGCATTAGAACAGGTCGAG
TCAGCCCTTGATGATTTGATTATAGAGTGGTGTAAAGCAGAGGCGGGAGCGCCTGCCATTCATCAGACGATTGGTGATTT
GAATGTGGGTCAGGAATATCATGTGACGGTCATTGCAATTGTTAAAAAGAATCAGGATAAACAACTGAATCCGAGCTCTG
AAACAGTCATTGACGAAGGCGATACACTTGTGATTTCCGGTGAGGGAACCGGACTGAAGAGGCTGATCCGGGAAAAATTA
ACAGCAAAGGGAGCTTAA

Upstream 100 bases:

>100_bases
AAATAGACATTTGCTATAATGACATACGCTTACATTTAAACATATATATGGTGTTAAAAGTGTTTATGGCTGGTTTTCAG
ATATGTAGGAGGGTTTATAT

Downstream 100 bases:

>100_bases
CCTAGTGTTAAGCCATGTTTAAAACCAGTCTTGATTGGGAAAGTTACCTCAATAAGAAGTTTGGGGGAAAAGAGAATGAA
TAAACAATGGACCATTATTT

Product: potassium transport accessory component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRVRESELPGIGQKVEMITRNRDKISIIIHHDGRRELYYFDENDHEECVASVQFDDAEARQMSAILGGMAYKPKALEQVE
SALDDLIIEWCKAEAGAPAIHQTIGDLNVGQEYHVTVIAIVKKNQDKQLNPSSETVIDEGDTLVISGEGTGLKRLIREKL
TAKGA

Sequences:

>Translated_165_residues
MRVRESELPGIGQKVEMITRNRDKISIIIHHDGRRELYYFDENDHEECVASVQFDDAEARQMSAILGGMAYKPKALEQVE
SALDDLIIEWCKAEAGAPAIHQTIGDLNVGQEYHVTVIAIVKKNQDKQLNPSSETVIDEGDTLVISGEGTGLKRLIREKL
TAKGA
>Mature_165_residues
MRVRESELPGIGQKVEMITRNRDKISIIIHHDGRRELYYFDENDHEECVASVQFDDAEARQMSAILGGMAYKPKALEQVE
SALDDLIIEWCKAEAGAPAIHQTIGDLNVGQEYHVTVIAIVKKNQDKQLNPSSETVIDEGDTLVISGEGTGLKRLIREKL
TAKGA

Specific function: Unknown

COG id: COG0490

COG function: function code P; Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK C-terminal domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRVC_BACSU (O32046)

Other databases:

- EMBL:   AL009126
- PIR:   F69980
- RefSeq:   NP_390642.1
- ProteinModelPortal:   O32046
- SMR:   O32046
- EnsemblBacteria:   EBBACT00000001544
- GeneID:   937539
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27640
- NMPDR:   fig|224308.1.peg.2767
- GenoList:   BSU27640
- GeneTree:   EBGT00050000002675
- HOGENOM:   HBG322825
- OMA:   ENDHEEC
- ProtClustDB:   CLSK886983
- BioCyc:   BSUB:BSU27640-MONOMER
- InterPro:   IPR006037

Pfam domain/function: PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 18344; Mature: 18344

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVRESELPGIGQKVEMITRNRDKISIIIHHDGRRELYYFDENDHEECVASVQFDDAEAR
CCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCHHHHEEECCCCCHHHH
QMSAILGGMAYKPKALEQVESALDDLIIEWCKAEAGAPAIHQTIGDLNVGQEYHVTVIAI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEEEE
VKKNQDKQLNPSSETVIDEGDTLVISGEGTGLKRLIREKLTAKGA
EECCCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVRESELPGIGQKVEMITRNRDKISIIIHHDGRRELYYFDENDHEECVASVQFDDAEAR
CCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCHHHHEEECCCCCHHHH
QMSAILGGMAYKPKALEQVESALDDLIIEWCKAEAGAPAIHQTIGDLNVGQEYHVTVIAI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEEEE
VKKNQDKQLNPSSETVIDEGDTLVISGEGTGLKRLIREKLTAKGA
EECCCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377