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The map label for this gene is yrvD

Identifier: 16079817

GI number: 16079817

Start: 2825846

End: 2826169

Strand: Reverse

Name: yrvD

Synonym: BSU27630

Alternate gene names: 16079817

Gene position: 2826169-2825846 (Counterclockwise)

Preceding gene: 16079818

Following gene: 16079816

Centisome position: 67.04

GC content: 37.65

Gene sequence:

>324_bases
ATGAATAAACAATGGACCATTATTTTCGCACTTATTTTCACCTTAATTGTCGCTATTTTCGCAGTCATTAATGTTCGATC
CGTAGAAGTTGATTACCTGTTTGGAAGATCAGAATGGCCGCTCATTCTTGTTATTTTGGGCTCAGTTTTAATGGGAGCAC
TGATCGTATTTTCTGTCGGCATTTTTCAGGTAATGAAATTGAAGCGGGAAATAAAAACCTTGCGGAAAGAAAATAGAACA
GCAATACATAAACAAGAGGATACTCATCTTGCTGATCAGACTGACACACAGGATGCATCAGCCATGATTGAGAAAAAAGA
CTAG

Upstream 100 bases:

>100_bases
AAAATTAACAGCAAAGGGAGCTTAACCTAGTGTTAAGCCATGTTTAAAACCAGTCTTGATTGGGAAAGTTACCTCAATAA
GAAGTTTGGGGGAAAAGAGA

Downstream 100 bases:

>100_bases
TTTTCGAATATTATTTGAAACCCCTCAGCCTGCTCTAGTATAATAGGGTGGTTGAGGGGTGAATTTATGTTAGCGTCAAA
AATGCGATGGGAAATCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNKQWTIIFALIFTLIVAIFAVINVRSVEVDYLFGRSEWPLILVILGSVLMGALIVFSVGIFQVMKLKREIKTLRKENRT
AIHKQEDTHLADQTDTQDASAMIEKKD

Sequences:

>Translated_107_residues
MNKQWTIIFALIFTLIVAIFAVINVRSVEVDYLFGRSEWPLILVILGSVLMGALIVFSVGIFQVMKLKREIKTLRKENRT
AIHKQEDTHLADQTDTQDASAMIEKKD
>Mature_107_residues
MNKQWTIIFALIFTLIVAIFAVINVRSVEVDYLFGRSEWPLILVILGSVLMGALIVFSVGIFQVMKLKREIKTLRKENRT
AIHKQEDTHLADQTDTQDASAMIEKKD

Specific function: Unknown

COG id: COG5416

COG function: function code S; Uncharacterized integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRVD_BACSU (O32045)

Other databases:

- EMBL:   AL009126
- PIR:   G69980
- RefSeq:   NP_390641.1
- EnsemblBacteria:   EBBACT00000000559
- GeneID:   937537
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27630
- NMPDR:   fig|224308.1.peg.2766
- GenoList:   BSU27630
- GeneTree:   EBGT00050000002747
- HOGENOM:   HBG727294
- OMA:   MAIWREF
- ProtClustDB:   CLSK887675
- BioCyc:   BSUB:BSU27630-MONOMER
- InterPro:   IPR010445

Pfam domain/function: PF06305 DUF1049

EC number: NA

Molecular weight: Translated: 12235; Mature: 12235

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1151412c)-; HASH(0x115c5cf8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKQWTIIFALIFTLIVAIFAVINVRSVEVDYLFGRSEWPLILVILGSVLMGALIVFSVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
IFQVMKLKREIKTLRKENRTAIHKQEDTHLADQTDTQDASAMIEKKD
HHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHCCCH
>Mature Secondary Structure
MNKQWTIIFALIFTLIVAIFAVINVRSVEVDYLFGRSEWPLILVILGSVLMGALIVFSVG
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
IFQVMKLKREIKTLRKENRTAIHKQEDTHLADQTDTQDASAMIEKKD
HHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377