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The map label for this gene is yqaT

Identifier: 16079672

GI number: 16079672

Start: 2688306

End: 2689601

Strand: Reverse

Name: yqaT

Synonym: BSU26190

Alternate gene names: 16079672

Gene position: 2689601-2688306 (Counterclockwise)

Preceding gene: 16079673

Following gene: 16079671

Centisome position: 63.8

GC content: 41.28

Gene sequence:

>1296_bases
GTGATTAAACAGGTAAATCCACATTTTAAAGAATTTCTCTTTGACTGGAATCAAAAGTTTCAGTTTCTTGTGGGTGGTTA
TGGATCATCCAAAAGCTATCATGTGGCGCTCAAGATTGTTCTGAAATTGCTCAGAGAAAAGCGTACTGCACTTGTTATCA
GAGAAGTGTACGACACACATAGGGACTCAACATTTTCACTTTTTGATGAACTTGTAAGTGATCTAAAATTAGATCATATC
GTTAGATGTGTATCTTCTCCGATGCAGATTCGATTTTCAAATGGCAGCAGAATCATCTTTAAAGGGATGGATAAGCCAGC
CAAACTGAAATCAATCAATAATATTTCCCTCATTTGGATTGAGGAATGCTCTGAAGTAAAATATGAGGGGTTCAAGGAGC
TTCTTGGACGTCTTCGTCACCCGACATTGCCGCTTCACATGATACTTTCAACAAATCCAGTTGGAGAGGACAATTGGACT
TTTAAGCATTTCTTCAAGGATGATAGGGAGAAGCGCTTTGTACTGGATGATAAGGAACTTTATGAAAAGCGGATAATCGT
TAGCAACGACACCTATTATCATCACTCAACGGCAGATGATAATCTTTTCCTGCCAGAAAGCTATGTCCAGCAACTTGAAG
AATTGAAGGAATACGATCCAGACCTTTACCGAATTGCGCGGAAAGGTCATTTTGGCGTGAATGGAATTCGGGTTCTGCCG
CAGTTTGAAGAGCGACCGCATGAAGAGGTTATGACTGCAATCTCTAATATTAACCGCCCGCTTAAACGGGTTGGCATGGA
CTTTGGTTTTGTGGAATCGTATAACGCCGTCGTTAGGGTTGCTGTGGATCATGAAAAGAAATATCTCTATATCTACTGGG
AGTATTACAAAAATGGATTAACGGATGATAAGACAGCCGAAGAACTTAAGGAATTTGCAGAGACTAAGGAATTAATCAAG
GCGGATTCAGCAGAGCCAAAGACAATCCGTTATTTTCAGCAACACGGTTTCAATATGGTGGGTGCCCGTAAATATCAAGG
ATCACGCCTTCAGTATACAAAGAAAATCAAGCGGTTCAGGAAGATCATTTGCTCTGATCGTTGCGAGAACACGATTTATG
AGCTTAAGCCGCTTGCTTATGCTACCGATAAGCTGGGGAACATCATAGAAGACGAGTTCACCATAGACCCGCATACACTG
TCAGCTATCTGGTACGCTCTCGATGATTATGAGGTAACCGATTTGAAAGAAGAATCAAAAGGAAGACCGCAAAGATCAAG
ACCAGGAAGGAGGTAA

Upstream 100 bases:

>100_bases
CATATGCGCTTAAATATCAACAAGAAAAAAATAGAGATCGAAGAACTTACAGAAGAAGATAAACCTTTTGAGATCACCAT
TGTAAACAAAGGTGATGACA

Downstream 100 bases:

>100_bases
AGCATGTCAAAAAAATCTGTTAAAGCACGAGTGATCAAAGCCTCTCCACCTACTGAATCAACGAAACAAATTTATGAAGA
TGAATTTGCTGACAGCTATG

Product: phage-related terminase large subunit; skin element

Products: NA

Alternate protein names: ORF50

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MIKQVNPHFKEFLFDWNQKFQFLVGGYGSSKSYHVALKIVLKLLREKRTALVIREVYDTHRDSTFSLFDELVSDLKLDHI
VRCVSSPMQIRFSNGSRIIFKGMDKPAKLKSINNISLIWIEECSEVKYEGFKELLGRLRHPTLPLHMILSTNPVGEDNWT
FKHFFKDDREKRFVLDDKELYEKRIIVSNDTYYHHSTADDNLFLPESYVQQLEELKEYDPDLYRIARKGHFGVNGIRVLP
QFEERPHEEVMTAISNINRPLKRVGMDFGFVESYNAVVRVAVDHEKKYLYIYWEYYKNGLTDDKTAEELKEFAETKELIK
ADSAEPKTIRYFQQHGFNMVGARKYQGSRLQYTKKIKRFRKIICSDRCENTIYELKPLAYATDKLGNIIEDEFTIDPHTL
SAIWYALDDYEVTDLKEESKGRPQRSRPGRR

Sequences:

>Translated_431_residues
MIKQVNPHFKEFLFDWNQKFQFLVGGYGSSKSYHVALKIVLKLLREKRTALVIREVYDTHRDSTFSLFDELVSDLKLDHI
VRCVSSPMQIRFSNGSRIIFKGMDKPAKLKSINNISLIWIEECSEVKYEGFKELLGRLRHPTLPLHMILSTNPVGEDNWT
FKHFFKDDREKRFVLDDKELYEKRIIVSNDTYYHHSTADDNLFLPESYVQQLEELKEYDPDLYRIARKGHFGVNGIRVLP
QFEERPHEEVMTAISNINRPLKRVGMDFGFVESYNAVVRVAVDHEKKYLYIYWEYYKNGLTDDKTAEELKEFAETKELIK
ADSAEPKTIRYFQQHGFNMVGARKYQGSRLQYTKKIKRFRKIICSDRCENTIYELKPLAYATDKLGNIIEDEFTIDPHTL
SAIWYALDDYEVTDLKEESKGRPQRSRPGRR
>Mature_431_residues
MIKQVNPHFKEFLFDWNQKFQFLVGGYGSSKSYHVALKIVLKLLREKRTALVIREVYDTHRDSTFSLFDELVSDLKLDHI
VRCVSSPMQIRFSNGSRIIFKGMDKPAKLKSINNISLIWIEECSEVKYEGFKELLGRLRHPTLPLHMILSTNPVGEDNWT
FKHFFKDDREKRFVLDDKELYEKRIIVSNDTYYHHSTADDNLFLPESYVQQLEELKEYDPDLYRIARKGHFGVNGIRVLP
QFEERPHEEVMTAISNINRPLKRVGMDFGFVESYNAVVRVAVDHEKKYLYIYWEYYKNGLTDDKTAEELKEFAETKELIK
ADSAEPKTIRYFQQHGFNMVGARKYQGSRLQYTKKIKRFRKIICSDRCENTIYELKPLAYATDKLGNIIEDEFTIDPHTL
SAIWYALDDYEVTDLKEESKGRPQRSRPGRR

Specific function: May function as a terminase

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xtmB and phage SPP1 terminase large subunit

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQAT_BACSU (P45916)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   C69946
- RefSeq:   NP_390496.1
- ProteinModelPortal:   P45916
- SMR:   P45916
- EnsemblBacteria:   EBBACT00000002656
- GeneID:   937721
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26190
- NMPDR:   fig|224308.1.peg.2621
- GenoList:   BSU26190
- GeneTree:   EBGT00050000005909
- HOGENOM:   HBG344663
- OMA:   DWNQKFQ
- ProtClustDB:   CLSK887121
- BioCyc:   BSUB:BSU26190-MONOMER
- InterPro:   IPR006701
- InterPro:   IPR006437
- TIGRFAMs:   TIGR01547

Pfam domain/function: PF04466 Terminase_3

EC number: NA

Molecular weight: Translated: 50937; Mature: 50937

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQVNPHFKEFLFDWNQKFQFLVGGYGSSKSYHVALKIVLKLLREKRTALVIREVYDTH
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RDSTFSLFDELVSDLKLDHIVRCVSSPMQIRFSNGSRIIFKGMDKPAKLKSINNISLIWI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHCCCCCEEEEEE
EECSEVKYEGFKELLGRLRHPTLPLHMILSTNPVGEDNWTFKHFFKDDREKRFVLDDKEL
ECHHHCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCEEECCCHHH
YEKRIIVSNDTYYHHSTADDNLFLPESYVQQLEELKEYDPDLYRIARKGHFGVNGIRVLP
HHCEEEEECCCEEECCCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEECC
QFEERPHEEVMTAISNINRPLKRVGMDFGFVESYNAVVRVAVDHEKKYLYIYWEYYKNGL
CHHCCCHHHHHHHHHHCCHHHHHHCCCCCHHHCCCEEEEEEEECCCCEEEEEEEHHCCCC
TDDKTAEELKEFAETKELIKADSAEPKTIRYFQQHGFNMVGARKYQGSRLQYTKKIKRFR
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH
KIICSDRCENTIYELKPLAYATDKLGNIIEDEFTIDPHTLSAIWYALDDYEVTDLKEESK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCEECCCCHHHC
GRPQRSRPGRR
CCCCCCCCCCC
>Mature Secondary Structure
MIKQVNPHFKEFLFDWNQKFQFLVGGYGSSKSYHVALKIVLKLLREKRTALVIREVYDTH
CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RDSTFSLFDELVSDLKLDHIVRCVSSPMQIRFSNGSRIIFKGMDKPAKLKSINNISLIWI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHCCCCCEEEEEE
EECSEVKYEGFKELLGRLRHPTLPLHMILSTNPVGEDNWTFKHFFKDDREKRFVLDDKEL
ECHHHCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCEEECCCHHH
YEKRIIVSNDTYYHHSTADDNLFLPESYVQQLEELKEYDPDLYRIARKGHFGVNGIRVLP
HHCEEEEECCCEEECCCCCCCEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEECC
QFEERPHEEVMTAISNINRPLKRVGMDFGFVESYNAVVRVAVDHEKKYLYIYWEYYKNGL
CHHCCCHHHHHHHHHHCCHHHHHHCCCCCHHHCCCEEEEEEEECCCCEEEEEEEHHCCCC
TDDKTAEELKEFAETKELIKADSAEPKTIRYFQQHGFNMVGARKYQGSRLQYTKKIKRFR
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHH
KIICSDRCENTIYELKPLAYATDKLGNIIEDEFTIDPHTLSAIWYALDDYEVTDLKEESK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCEECCCCHHHC
GRPQRSRPGRR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895