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The map label for this gene is yoqC

Identifier: 16079127

GI number: 16079127

Start: 2200376

End: 2200783

Strand: Reverse

Name: yoqC

Synonym: BSU20680

Alternate gene names: 16079127

Gene position: 2200783-2200376 (Counterclockwise)

Preceding gene: 16079128

Following gene: 16079126

Centisome position: 52.21

GC content: 34.56

Gene sequence:

>408_bases
TTGGAGGTTAATGTGAAAACAAACCAAAGAGAAAAATTCATCCGAAATGGTATCCCATATGATGAACTTGATACACAAAT
GATTCATTTAATTGATATTTTAAATTTCAAAATTGGATTAAAAACACGCCACTGTTGTTTTGGGCATAAACCATACGAAG
AAATTCAAGTGATGTTTGAAGACGAAGTGAACATAAAAGAAGATCAGATTCTAGAATTAGCAGAACTAGCGGGTAGGGAA
TGGAAAGGCCTACAGTTAAGCTTTAGCAAATGGGCAAGATTTTCCCCATTGATGTTTAATTGGTCATTGGTGTTATCGAA
GAGATTCAGAAACCCAGAAGATCCAAATAAATACCGTTATCTAAGATCAGTTGAAGAATTCTTTGAGAGCTATGCTGCAA
AGAAGTGA

Upstream 100 bases:

>100_bases
CTATGAAAACTCCATAAAGGAGCAAATTAATCATGAAAATAAACAAAAGGCTGCAATAGAAAAATTTGAAGCGTGGAGTG
GCCAGGAGGTGTAACTGTTA

Downstream 100 bases:

>100_bases
TAAAAGATGCATTTTAAATTAAATGAGACGGAGGTATTTAATGGAAAGTTATCTAACAGTAATTGAACAGAATGGACAGC
TTTTGGTTGACAGCCGTGAA

Product: nucleotide-binding protein; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEVNVKTNQREKFIRNGIPYDELDTQMIHLIDILNFKIGLKTRHCCFGHKPYEEIQVMFEDEVNIKEDQILELAELAGRE
WKGLQLSFSKWARFSPLMFNWSLVLSKRFRNPEDPNKYRYLRSVEEFFESYAAKK

Sequences:

>Translated_135_residues
MEVNVKTNQREKFIRNGIPYDELDTQMIHLIDILNFKIGLKTRHCCFGHKPYEEIQVMFEDEVNIKEDQILELAELAGRE
WKGLQLSFSKWARFSPLMFNWSLVLSKRFRNPEDPNKYRYLRSVEEFFESYAAKK
>Mature_135_residues
MEVNVKTNQREKFIRNGIPYDELDTQMIHLIDILNFKIGLKTRHCCFGHKPYEEIQVMFEDEVNIKEDQILELAELAGRE
WKGLQLSFSKWARFSPLMFNWSLVLSKRFRNPEDPNKYRYLRSVEEFFESYAAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOQC_BACSU (O34834)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389950.1
- EnsemblBacteria:   EBBACT00000001974
- GeneID:   936489
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20680
- NMPDR:   fig|224308.1.peg.2073
- GenoList:   BSU20680
- BioCyc:   BSUB:BSU20680-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16255; Mature: 16255

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVNVKTNQREKFIRNGIPYDELDTQMIHLIDILNFKIGLKTRHCCFGHKPYEEIQVMFE
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC
DEVNIKEDQILELAELAGREWKGLQLSFSKWARFSPLMFNWSLVLSKRFRNPEDPNKYRY
CCCCCCHHHHHHHHHHCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
LRSVEEFFESYAAKK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MEVNVKTNQREKFIRNGIPYDELDTQMIHLIDILNFKIGLKTRHCCFGHKPYEEIQVMFE
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC
DEVNIKEDQILELAELAGREWKGLQLSFSKWARFSPLMFNWSLVLSKRFRNPEDPNKYRY
CCCCCCHHHHHHHHHHCCCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
LRSVEEFFESYAAKK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377