Click here to switch to the map view.

The map label for this gene is yoqB

Identifier: 16079128

GI number: 16079128

Start: 2200790

End: 2201128

Strand: Reverse

Name: yoqB

Synonym: BSU20690

Alternate gene names: 16079128

Gene position: 2201128-2200790 (Counterclockwise)

Preceding gene: 16079129

Following gene: 16079127

Centisome position: 52.21

GC content: 35.69

Gene sequence:

>339_bases
ATGAAGGAATTTCATTTGCACAAATATCCCGTGACATCAGTTGAAGGGAATGAGTATGCCGTTAGCATTTATAACGATAG
ACACTCAAAAGGTTTTGTCAAAGTATCTTTATATAAAAAGGTGCGCGGTTTTTTCAGGAAAGAAAAATTCAAGTGTCTTA
CAAGAGAAGGAGACTTCGCTCCGAGTTATTTCGAAGAAAAGTGGGATTACGATTACATACAGATGGCAATCAATGAAGTT
ATTAACTATGAAAACTCCATAAAGGAGCAAATTAATCATGAAAATAAACAAAAGGCTGCAATAGAAAAATTTGAAGCGTG
GAGTGGCCAGGAGGTGTAA

Upstream 100 bases:

>100_bases
TAGACAAACTACCGGTTTTAATCTTATATAAACCTGAATTTTTATATTCGAAAGGAAAAGCAGTTCAAAGATACAAACGA
CTTTATGAGGAGGACGTGGA

Downstream 100 bases:

>100_bases
CTGTTATTGGAGGTTAATGTGAAAACAAACCAAAGAGAAAAATTCATCCGAAATGGTATCCCATATGATGAACTTGATAC
ACAAATGATTCATTTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKEFHLHKYPVTSVEGNEYAVSIYNDRHSKGFVKVSLYKKVRGFFRKEKFKCLTREGDFAPSYFEEKWDYDYIQMAINEV
INYENSIKEQINHENKQKAAIEKFEAWSGQEV

Sequences:

>Translated_112_residues
MKEFHLHKYPVTSVEGNEYAVSIYNDRHSKGFVKVSLYKKVRGFFRKEKFKCLTREGDFAPSYFEEKWDYDYIQMAINEV
INYENSIKEQINHENKQKAAIEKFEAWSGQEV
>Mature_112_residues
MKEFHLHKYPVTSVEGNEYAVSIYNDRHSKGFVKVSLYKKVRGFFRKEKFKCLTREGDFAPSYFEEKWDYDYIQMAINEV
INYENSIKEQINHENKQKAAIEKFEAWSGQEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOQB_BACSU (O34831)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389951.1
- EnsemblBacteria:   EBBACT00000001761
- GeneID:   939431
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20690
- NMPDR:   fig|224308.1.peg.2074
- GenoList:   BSU20690
- BioCyc:   BSUB:BSU20690-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13428; Mature: 13428

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFHLHKYPVTSVEGNEYAVSIYNDRHSKGFVKVSLYKKVRGFFRKEKFKCLTREGDFA
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
PSYFEEKWDYDYIQMAINEVINYENSIKEQINHENKQKAAIEKFEAWSGQEV
CCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKEFHLHKYPVTSVEGNEYAVSIYNDRHSKGFVKVSLYKKVRGFFRKEKFKCLTREGDFA
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCC
PSYFEEKWDYDYIQMAINEVINYENSIKEQINHENKQKAAIEKFEAWSGQEV
CCHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377