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The map label for this gene is yobA

Identifier: 16078941

GI number: 16078941

Start: 2049950

End: 2050312

Strand: Reverse

Name: yobA

Synonym: BSU18810

Alternate gene names: 16078941

Gene position: 2050312-2049950 (Counterclockwise)

Preceding gene: 16078943

Following gene: 16078939

Centisome position: 48.64

GC content: 34.44

Gene sequence:

>363_bases
ATGCCTAAAATCGGAGTAAGCTTGATAGTGCTCATTATGCTCATTATTTTCCTTGCAGGCTGCAATAAAAATGAACAAAA
CGGAGACGAAACAAAGATGCAGAGCCTAGTAGGCTATGTCGTGCTTAAAGACAATGAAAGGGCAATTCTCATTACCGATA
CAAAAGCTCCAGGAAAAGAAGATTACAATCTTTCTGAAGGACAACTTATGAACAAGTTTAAAAATAACATAGTAATTGTA
GGATTAAGTGAGATTGATAACACAGATGATCTCAAAAGAGGTGAAAAAATAAAAGTGTGGTTCCATACACGAAAAGAGTC
AAATCCACCAAGTGCAACGATACAAAAATATGAATTATTATAA

Upstream 100 bases:

>100_bases
GAATGAGTATGCTGCTGTTATGAATTGCAAAAAGAAGTAGATGGGTTGGGTGATATCCTGTTGTTTATTTTAAAGATGAG
TTTAAAGAGGAGGAAGAAAG

Downstream 100 bases:

>100_bases
AAAAATTGTTGAATTCTCATATAGATAACCTCTGAGACAACAAATGTTGTTCTATTGCATTGAAACTGCCAGTGACCAAT
ATCAAGTTCAGTTATGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MPKIGVSLIVLIMLIIFLAGCNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQLMNKFKNNIVIV
GLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL

Sequences:

>Translated_120_residues
MPKIGVSLIVLIMLIIFLAGCNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQLMNKFKNNIVIV
GLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL
>Mature_119_residues
PKIGVSLIVLIMLIIFLAGCNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKEDYNLSEGQLMNKFKNNIVIVG
LSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOBA_BACSU (O31835)

Other databases:

- EMBL:   AL009126
- PIR:   B69898
- RefSeq:   NP_389762.1
- PDB:   2JQO
- PDBsum:   2JQO
- ProteinModelPortal:   O31835
- SMR:   O31835
- EnsemblBacteria:   EBBACT00000000870
- GeneID:   940122
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18810
- NMPDR:   fig|224308.1.peg.1884
- GenoList:   BSU18810
- GeneTree:   EBGT00050000002596
- HOGENOM:   HBG338098
- OMA:   NISKFES
- ProtClustDB:   CLSK2393384
- BioCyc:   BSUB:BSU18810-MONOMER
- InterPro:   IPR021598
- InterPro:   IPR012340
- Gene3D:   G3DSA:2.40.50.140

Pfam domain/function: PF11518 DUF3221

EC number: NA

Molecular weight: Translated: 13537; Mature: 13406

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIGVSLIVLIMLIIFLAGCNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKE
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEEECCCCEEEEECCCCCCCC
DYNLSEGQLMNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL
CCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECC
>Mature Secondary Structure 
PKIGVSLIVLIMLIIFLAGCNKNEQNGDETKMQSLVGYVVLKDNERAILITDTKAPGKE
CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEEEEECCCCEEEEECCCCCCCC
DYNLSEGQLMNKFKNNIVIVGLSEIDNTDDLKRGEKIKVWFHTRKESNPPSATIQKYELL
CCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377