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The map label for this gene is yoaZ

Identifier: 16078939

GI number: 16078939

Start: 2047675

End: 2048307

Strand: Reverse

Name: yoaZ

Synonym: BSU18790

Alternate gene names: 16078939

Gene position: 2048307-2047675 (Counterclockwise)

Preceding gene: 16078941

Following gene: 16078938

Centisome position: 48.59

GC content: 38.07

Gene sequence:

>633_bases
ATGCAAACGAGAAAAGTTTATCTCTACGTATTTCACACAATGTCAGACTGGGAATATGGATATTTAATTGCGGAACTAAA
CTCAGGGAGATACTTTAAACAAGATGCAGCATCTTTAAAAGTAGTTACAGTAGGGGTTAATAAAGAAATGATAACTACGT
TGGGAGGATTAAGCATAAAACCAGATATTTCTCTTGACGAATGTACTCTTGGGAGTCAAGATCTTATCATTTTACCCGGA
GGAAACACTTGGGGAGAAGATATTCATCAGCCGATCTTGAAAAAAGTTGGCGACGCTTTAAAGCTCGGCACGACTATTGC
TGCAATTTGTGGGGCAACCTTGGGCCTCGCGAATGAAGGATACTTAAATTCGAGAAAGCACACAAGCAATGACCTCGACT
ATATGAATATGGTCTGCCCTAATTACAAAGGAGAAACATTCTATGAAAAGGGGCCTGCAGTATCTGATGAAAATTTGGTT
ACTGCATCAGGAATTGCTCCTCTGGAATTTGCGGTAGAAGTATTGAAAAAATTAGATGTATTTGCACCAGATACATTGCG
TTCATGGTATAAGCTAAATAAGACTCAAAAGCCTGAATATTTCTTTGAGCTAATGAATACAATAAATCGATAG

Upstream 100 bases:

>100_bases
AACAAGGGCATAAGAATAGAATCAACAAAAAAGCTGACAATGACTGTCAGCAAAGTCATCTATTAGAAAGCTTTATCAAT
TGTGATTGGAGTGTTATTGG

Downstream 100 bases:

>100_bases
AAAACACTTTAGCAGTTTTTTGTAGTGCTCCTGAACTTATAGGAGCATTTTTTATATGTGTCTAGGAGCTAAATAAAGAA
ATGCAGAAACTTTTAAAAAG

Product: factor of the oxidative stress response

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQTRKVYLYVFHTMSDWEYGYLIAELNSGRYFKQDAASLKVVTVGVNKEMITTLGGLSIKPDISLDECTLGSQDLIILPG
GNTWGEDIHQPILKKVGDALKLGTTIAAICGATLGLANEGYLNSRKHTSNDLDYMNMVCPNYKGETFYEKGPAVSDENLV
TASGIAPLEFAVEVLKKLDVFAPDTLRSWYKLNKTQKPEYFFELMNTINR

Sequences:

>Translated_210_residues
MQTRKVYLYVFHTMSDWEYGYLIAELNSGRYFKQDAASLKVVTVGVNKEMITTLGGLSIKPDISLDECTLGSQDLIILPG
GNTWGEDIHQPILKKVGDALKLGTTIAAICGATLGLANEGYLNSRKHTSNDLDYMNMVCPNYKGETFYEKGPAVSDENLV
TASGIAPLEFAVEVLKKLDVFAPDTLRSWYKLNKTQKPEYFFELMNTINR
>Mature_210_residues
MQTRKVYLYVFHTMSDWEYGYLIAELNSGRYFKQDAASLKVVTVGVNKEMITTLGGLSIKPDISLDECTLGSQDLIILPG
GNTWGEDIHQPILKKVGDALKLGTTIAAICGATLGLANEGYLNSRKHTSNDLDYMNMVCPNYKGETFYEKGPAVSDENLV
TASGIAPLEFAVEVLKKLDVFAPDTLRSWYKLNKTQKPEYFFELMNTINR

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOAZ_BACSU (O34947)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   A69898
- RefSeq:   NP_389760.1
- HSSP:   Q8UGZ9
- ProteinModelPortal:   O34947
- SMR:   O34947
- EnsemblBacteria:   EBBACT00000000534
- GeneID:   940031
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18790
- NMPDR:   fig|224308.1.peg.1882
- GenoList:   BSU18790
- GeneTree:   EBGT00050000001000
- HOGENOM:   HBG400487
- OMA:   LPGGNTW
- ProtClustDB:   CLSK887391
- BioCyc:   BSUB:BSU18790-MONOMER
- InterPro:   IPR002818

Pfam domain/function: PF01965 DJ-1_PfpI

EC number: NA

Molecular weight: Translated: 23420; Mature: 23420

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS51276 PEPTIDASE_C56_PFPI

Important sites: ACT_SITE 110-110

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTRKVYLYVFHTMSDWEYGYLIAELNSGRYFKQDAASLKVVTVGVNKEMITTLGGLSIK
CCCCEEEEEEEEECCCCCEEEEEEEECCCCEECCCCCCEEEEEEECCHHHHHHHCCCEEC
PDISLDECTLGSQDLIILPGGNTWGEDIHQPILKKVGDALKLGTTIAAICGATLGLANEG
CCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YLNSRKHTSNDLDYMNMVCPNYKGETFYEKGPAVSDENLVTASGIAPLEFAVEVLKKLDV
CCCCCCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCC
FAPDTLRSWYKLNKTQKPEYFFELMNTINR
CCCHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQTRKVYLYVFHTMSDWEYGYLIAELNSGRYFKQDAASLKVVTVGVNKEMITTLGGLSIK
CCCCEEEEEEEEECCCCCEEEEEEEECCCCEECCCCCCEEEEEEECCHHHHHHHCCCEEC
PDISLDECTLGSQDLIILPGGNTWGEDIHQPILKKVGDALKLGTTIAAICGATLGLANEG
CCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YLNSRKHTSNDLDYMNMVCPNYKGETFYEKGPAVSDENLVTASGIAPLEFAVEVLKKLDV
CCCCCCCCCCCCHHHHHHCCCCCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHCC
FAPDTLRSWYKLNKTQKPEYFFELMNTINR
CCCHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377