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The map label for this gene is ynzC

Identifier: 16078851

GI number: 16078851

Start: 1919459

End: 1919692

Strand: Direct

Name: ynzC

Synonym: BSU17880

Alternate gene names: 16078851

Gene position: 1919459-1919692 (Clockwise)

Preceding gene: 16078850

Following gene: 16078852

Centisome position: 45.53

GC content: 36.32

Gene sequence:

>234_bases
ATGATTTCAAACGCGAAAATTGCCAGAATTAATGAACTTGCTGCCAAAGCTAAAGCTGGCGTTATTACAGAAGAAGAAAA
AGCCGAACAGCAAAAGCTCCGTCAAGAGTACTTGAAAGGTTTTCGTTCTTCTATGAAGAACACGTTAAAAAGTGTGAAAA
TCATTGACCCAGAAGGCAATGATGTTACACCAGAAAAGCTAAAAAGAGAACAAAGAAATAACAAACTTCACTAA

Upstream 100 bases:

>100_bases
TCAGGAATACATAGAGAATGAAGAGACTGCAGAGTGAATCAGTTGTAAAACTTTTTTTGATCTAGTACTATATAGACAAA
ATGCAATAAAGGAGTTTAAC

Downstream 100 bases:

>100_bases
TATAAGAGGAATACGGCAATATCGTATTCCTCTTTTGCATATACTATAATCAAAACTCTTATGTGACAAAATTCAACAAG
TTTCTCTCAAATTTAAGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLKSVKIIDPEGNDVTPEKLKREQRNNKLH

Sequences:

>Translated_77_residues
MISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLKSVKIIDPEGNDVTPEKLKREQRNNKLH
>Mature_77_residues
MISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLKSVKIIDPEGNDVTPEKLKREQRNNKLH

Specific function: Unknown

COG id: COG4224

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0291 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNZC_BACSU (O31818)

Other databases:

- EMBL:   AL009126
- PIR:   E69894
- RefSeq:   NP_389671.1
- PDB:   2HEP
- PDB:   2JVD
- PDB:   3BHP
- PDBsum:   2HEP
- PDBsum:   2JVD
- PDBsum:   3BHP
- ProteinModelPortal:   O31818
- SMR:   O31818
- EnsemblBacteria:   EBBACT00000003383
- GeneID:   939578
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17880
- NMPDR:   fig|224308.1.peg.1792
- GenoList:   BSU17880
- GeneTree:   EBGT00050000002914
- HOGENOM:   HBG727491
- OMA:   TIENTTI
- ProtClustDB:   CLSK887351
- BioCyc:   BSUB:BSU17880-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01103
- InterPro:   IPR009242
- InterPro:   IPR023218
- Gene3D:   G3DSA:1.10.287.540

Pfam domain/function: PF05979 DUF896

EC number: NA

Molecular weight: Translated: 8806; Mature: 8806

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLKSVKIIDPEGN
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DVTPEKLKREQRNNKLH
CCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLKSVKIIDPEGN
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DVTPEKLKREQRNNKLH
CCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377