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The map label for this gene is yneB

Identifier: 16078850

GI number: 16078850

Start: 1918742

End: 1919395

Strand: Direct

Name: yneB

Synonym: BSU17870

Alternate gene names: 16078850

Gene position: 1918742-1919395 (Clockwise)

Preceding gene: 16078849

Following gene: 16078851

Centisome position: 45.52

GC content: 44.19

Gene sequence:

>654_bases
ATGAAAGCACTCATTTATGCCCGTGTAAGCACAAATAAAGAACAGCAGGAAACGTCATTAAAGCGGCAGGAGGAGGAGCT
TACGGCCATTGCAGCGGAGAACGGCATGGAAGTGGTCAAAGTGATTTCAGAAAAAGCCAGCGGATATGAAATGGATCGGG
ATGGTGTATTTGAGCTGCTCGATGAGATTAAGAACGCTGATATTGATGTCATTTTGGTTCAGGATGAGACAAGGCTCGGA
CGGGGAAACGCAAAAATCGCACTGCTTCATTGTATTTATAGAGAAGGTGTGAAAGTCTATACAACGGCTCATAGAGGTGA
ACTGGAGTTATCGGAGGCTGACTCAATGGTCTTGGAAATCGTCAGCATTGTGGAAGAGTATCAGCGAAAGATTCACAACA
TGAAAATCAGACGGGGAATGAAACGTGCAGTAAAAAACGGTTTTAAACCGCAAAAAAACTTAAAAAACCAACATGGGAAC
AGTGGAAAAGAAAAAATAGAGGTGCCAATCTCAGAGATCGTCCGCCTGAGAGCGAATAAACTGACGTTTGCTGAAATCGC
GGCTACCCTAAGAGGGTTTGGCTATGATGTCTCTAAAGCAACCGTTCACCGGCGTTTTCAGGAATACATAGAGAATGAAG
AGACTGCAGAGTGA

Upstream 100 bases:

>100_bases
TGATATCCAGCCGGGTGATGAGTTAGTGATCCCATTGAAAAAGAAGCATCAGGATGCATATGAATTAGCAACTGTAAGAT
AGAGAGGAAAGAGAGATAAA

Downstream 100 bases:

>100_bases
ATCAGTTGTAAAACTTTTTTTGATCTAGTACTATATAGACAAAATGCAATAAAGGAGTTTAACATGATTTCAAACGCGAA
AATTGCCAGAATTAATGAAC

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKALIYARVSTNKEQQETSLKRQEEELTAIAAENGMEVVKVISEKASGYEMDRDGVFELLDEIKNADIDVILVQDETRLG
RGNAKIALLHCIYREGVKVYTTAHRGELELSEADSMVLEIVSIVEEYQRKIHNMKIRRGMKRAVKNGFKPQKNLKNQHGN
SGKEKIEVPISEIVRLRANKLTFAEIAATLRGFGYDVSKATVHRRFQEYIENEETAE

Sequences:

>Translated_217_residues
MKALIYARVSTNKEQQETSLKRQEEELTAIAAENGMEVVKVISEKASGYEMDRDGVFELLDEIKNADIDVILVQDETRLG
RGNAKIALLHCIYREGVKVYTTAHRGELELSEADSMVLEIVSIVEEYQRKIHNMKIRRGMKRAVKNGFKPQKNLKNQHGN
SGKEKIEVPISEIVRLRANKLTFAEIAATLRGFGYDVSKATVHRRFQEYIENEETAE
>Mature_217_residues
MKALIYARVSTNKEQQETSLKRQEEELTAIAAENGMEVVKVISEKASGYEMDRDGVFELLDEIKNADIDVILVQDETRLG
RGNAKIALLHCIYREGVKVYTTAHRGELELSEADSMVLEIVSIVEEYQRKIHNMKIRRGMKRAVKNGFKPQKNLKNQHGN
SGKEKIEVPISEIVRLRANKLTFAEIAATLRGFGYDVSKATVHRRFQEYIENEETAE

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNEB_BACSU (Q45057)

Other databases:

- EMBL:   Z73234
- EMBL:   AL009126
- PIR:   G69890
- RefSeq:   NP_389670.1
- HSSP:   P03012
- ProteinModelPortal:   Q45057
- SMR:   Q45057
- EnsemblBacteria:   EBBACT00000001366
- GeneID:   939557
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17870
- NMPDR:   fig|224308.1.peg.1791
- GenoList:   BSU17870
- GeneTree:   EBGT00050000001730
- HOGENOM:   HBG313557
- OMA:   VHRRYQE
- ProtClustDB:   CLSK873298
- BioCyc:   BSUB:BSU17870-MONOMER
- InterPro:   IPR006119
- Gene3D:   G3DSA:3.40.50.1390
- SMART:   SM00857

Pfam domain/function: PF00239 Resolvase; SSF53041 Resolv_N

EC number: NA

Molecular weight: Translated: 24740; Mature: 24740

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00397 RECOMBINASES_1; PS00398 RECOMBINASES_2

Important sites: ACT_SITE 10-10

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALIYARVSTNKEQQETSLKRQEEELTAIAAENGMEVVKVISEKASGYEMDRDGVFELL
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHH
DEIKNADIDVILVQDETRLGRGNAKIALLHCIYREGVKVYTTAHRGELELSEADSMVLEI
HHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHH
VSIVEEYQRKIHNMKIRRGMKRAVKNGFKPQKNLKNQHGNSGKEKIEVPISEIVRLRANK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEECCHHHHHHHHHCC
LTFAEIAATLRGFGYDVSKATVHRRFQEYIENEETAE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKALIYARVSTNKEQQETSLKRQEEELTAIAAENGMEVVKVISEKASGYEMDRDGVFELL
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHH
DEIKNADIDVILVQDETRLGRGNAKIALLHCIYREGVKVYTTAHRGELELSEADSMVLEI
HHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHH
VSIVEEYQRKIHNMKIRRGMKRAVKNGFKPQKNLKNQHGNSGKEKIEVPISEIVRLRANK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEECCHHHHHHHHHCC
LTFAEIAATLRGFGYDVSKATVHRRFQEYIENEETAE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969507; 9384377