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The map label for this gene is ymaB

Identifier: 16078803

GI number: 16078803

Start: 1872128

End: 1872748

Strand: Direct

Name: ymaB

Synonym: BSU17400

Alternate gene names: 16078803

Gene position: 1872128-1872748 (Clockwise)

Preceding gene: 16078802

Following gene: 255767408

Centisome position: 44.41

GC content: 43.96

Gene sequence:

>621_bases
ATGGGAAAAATGGACGAAATGATTTTAGTTGCCCCGCGCGATGATGTGTTTAAAAAAGAAAGCTTAACCTTCCAGGGCGT
GTACAGTGAAGATAGCAGAGTAGCAGAAATCATGGCTCAGATTGAAGCGGCCTATCGTGAAATGAGAAGAGGGGACGCAG
AAGAAGATCCGCGTTTCAAGCAGCCGATACCTTATGTCGTCATTAAGCGTGAAGATGAAGTTTTTCTTTACGAGCGGCTG
GCTGGCGGCGGTGAATCACGTCTGCACAACAAGCTTTCTCTCGGTTTTGGCGGCCATATGAACGCCATCGAAGGGGCAGC
TTCATTTGCTGAAGTCTTAAAGCTGAACACAGACCGTGAGCTTGAGGAAGAACTGCAAATAAATGAAGAAGATAAACAGG
CGATTGTCACACTGGGATTGATCAATGATGATGAAAACAGTGTTGGCAAAGTGCATATCGGTATTCTTTCTGCGCTTCAA
TTAAAGCCTGGCGCACAAGTGGAAGTGAAGGAGAAAGAACAAATTGCGGGTAAATGGATGAAAGTTTCTGAATTAAAACA
GGATGATATCTACAACCGTCTGGAAACATGGTCACAGTTTGTTGTTGATATTCTTGAATAA

Upstream 100 bases:

>100_bases
CCGCTCAAAGATGATGACTTTTATTTTGAAGATGAAAAAGAGCAGATATAATATCTGCTCTTTTCGGCTTGAAGGTTCAA
ATGAGGAGGACGCAGTACCC

Downstream 100 bases:

>100_bases
AAAAACCCGGTTTCTCGCGATGAGGAGCCGGGTTTTTTTATGAGACGCTCGTCCCCGTCTCGGCTATGATTCTAGGATCA
CAATAGCGTCAAAGCCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MGKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRRGDAEEDPRFKQPIPYVVIKREDEVFLYERL
AGGGESRLHNKLSLGFGGHMNAIEGAASFAEVLKLNTDRELEEELQINEEDKQAIVTLGLINDDENSVGKVHIGILSALQ
LKPGAQVEVKEKEQIAGKWMKVSELKQDDIYNRLETWSQFVVDILE

Sequences:

>Translated_206_residues
MGKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRRGDAEEDPRFKQPIPYVVIKREDEVFLYERL
AGGGESRLHNKLSLGFGGHMNAIEGAASFAEVLKLNTDRELEEELQINEEDKQAIVTLGLINDDENSVGKVHIGILSALQ
LKPGAQVEVKEKEQIAGKWMKVSELKQDDIYNRLETWSQFVVDILE
>Mature_205_residues
GKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRRGDAEEDPRFKQPIPYVVIKREDEVFLYERLA
GGGESRLHNKLSLGFGGHMNAIEGAASFAEVLKLNTDRELEEELQINEEDKQAIVTLGLINDDENSVGKVHIGILSALQL
KPGAQVEVKEKEQIAGKWMKVSELKQDDIYNRLETWSQFVVDILE

Specific function: Unknown

COG id: COG4112

COG function: function code R; Predicted phosphoesterase (MutT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YMAB_BACSU (P50619)

Other databases:

- EMBL:   Z68500
- EMBL:   AL009126
- EMBL:   D14666
- PIR:   D69883
- RefSeq:   NP_389622.1
- ProteinModelPortal:   P50619
- SMR:   P50619
- EnsemblBacteria:   EBBACT00000001844
- GeneID:   939453
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17400
- NMPDR:   fig|224308.1.peg.1744
- GenoList:   BSU17400
- GeneTree:   EBGT00050000002275
- HOGENOM:   HBG338014
- OMA:   PIPYVVI
- ProtClustDB:   CLSK885493
- BioCyc:   BSUB:BSU17400-MONOMER
- InterPro:   IPR000086
- Gene3D:   G3DSA:3.90.79.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23388; Mature: 23257

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRRGDAEEDPRFK
CCCCCCEEEECCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QPIPYVVIKREDEVFLYERLAGGGESRLHNKLSLGFGGHMNAIEGAASFAEVLKLNTDRE
CCCCEEEEECCCCEEEHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCH
LEEELQINEEDKQAIVTLGLINDDENSVGKVHIGILSALQLKPGAQVEVKEKEQIAGKWM
HHHHHCCCCCCCEEEEEEEEEECCCCCCCEEEEHHHHHHCCCCCCCEEEHHHHHHHHHHH
KVSELKQDDIYNRLETWSQFVVDILE
HHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GKMDEMILVAPRDDVFKKESLTFQGVYSEDSRVAEIMAQIEAAYREMRRGDAEEDPRFK
CCCCCEEEECCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
QPIPYVVIKREDEVFLYERLAGGGESRLHNKLSLGFGGHMNAIEGAASFAEVLKLNTDRE
CCCCEEEEECCCCEEEHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCH
LEEELQINEEDKQAIVTLGLINDDENSVGKVHIGILSALQLKPGAQVEVKEKEQIAGKWM
HHHHHCCCCCCCEEEEEEEEEECCCCCCCEEEEHHHHHHCCCCCCCEEEHHHHHHHHHHH
KVSELKQDDIYNRLETWSQFVVDILE
HHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8407798