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The map label for this gene is yjlB

Identifier: 16078292

GI number: 16078292

Start: 1297726

End: 1298223

Strand: Direct

Name: yjlB

Synonym: BSU12270

Alternate gene names: 16078292

Gene position: 1297726-1298223 (Clockwise)

Preceding gene: 16078288

Following gene: 16078293

Centisome position: 30.78

GC content: 52.01

Gene sequence:

>498_bases
ATGGAAAGAGAGACACAGACATACTTCTTTCCGGATGACGGCAGGATTCCGAATCACCCTGATTTTCCGCTCGTGGTGTA
TCAAAACGCGCTTAAGGACACCGGACTGGCAGAGCGGATCGTCACCCGGCATGGCTGGTCAAACAGCTGGTCAGGGAGTG
TTTTTCCATACCATCATTATCACAGCAATACGCATGAAGTCCTGATTGCCCTTAGGAGAGAGGCTGTGATTCAGTTTGGG
GGAGAAAAAGGGGCTGCCATCCCTTTCAAATCAGGCGACGCAGTCGTGATTCCAGCCGGAGTCGGACATAAAAAGCTCAG
CTCAAGCCCCGATTTTACTGTCCTTGGCGCCTATCCCGGTGGCGTTCAGTACGATATGAAGACGGGGAAGCCGAATGAGC
GGGAGGAAGCGGTCAAACAGATTAAGCAGGCGGCGTTGCCGGCGAATGATCCGATCACAGGAAAAAGAGAGCCTCTATTG
GAAATATGGGTAAAGTGA

Upstream 100 bases:

>100_bases
ACTATACTATTCGGTATCATGCAGATCAATGGAATCATGAGAAAAACATCATGTTTGGCGAACCGCTATATGTGGAAGAC
AAAAAAGGGAGGTGAAATTG

Downstream 100 bases:

>100_bases
AGGGGAGAAATTGCTGGATTGTCAATAACTAGTGCCGCAGAAACGATATGACATGAGCTCCATATAAATTAATTTCATAA
TCGAAGCAATTCACGTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MERETQTYFFPDDGRIPNHPDFPLVVYQNALKDTGLAERIVTRHGWSNSWSGSVFPYHHYHSNTHEVLIALRREAVIQFG
GEKGAAIPFKSGDAVVIPAGVGHKKLSSSPDFTVLGAYPGGVQYDMKTGKPNEREEAVKQIKQAALPANDPITGKREPLL
EIWVK

Sequences:

>Translated_165_residues
MERETQTYFFPDDGRIPNHPDFPLVVYQNALKDTGLAERIVTRHGWSNSWSGSVFPYHHYHSNTHEVLIALRREAVIQFG
GEKGAAIPFKSGDAVVIPAGVGHKKLSSSPDFTVLGAYPGGVQYDMKTGKPNEREEAVKQIKQAALPANDPITGKREPLL
EIWVK
>Mature_165_residues
MERETQTYFFPDDGRIPNHPDFPLVVYQNALKDTGLAERIVTRHGWSNSWSGSVFPYHHYHSNTHEVLIALRREAVIQFG
GEKGAAIPFKSGDAVVIPAGVGHKKLSSSPDFTVLGAYPGGVQYDMKTGKPNEREEAVKQIKQAALPANDPITGKREPLL
EIWVK

Specific function: Unknown

COG id: COG4297

COG function: function code S; Uncharacterized protein containing double-stranded beta helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJLB_BACSU (O34612)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   H69851
- RefSeq:   NP_389109.1
- ProteinModelPortal:   O34612
- SMR:   O34612
- EnsemblBacteria:   EBBACT00000000831
- GeneID:   939411
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12270
- NMPDR:   fig|224308.1.peg.1228
- GenoList:   BSU12270
- GeneTree:   EBGT00050000002815
- HOGENOM:   HBG472941
- OMA:   PAGTGHK
- ProtClustDB:   CLSK2460907
- BioCyc:   BSUB:BSU12270-MONOMER
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710
- InterPro:   IPR014500
- Gene3D:   G3DSA:2.60.120.10
- PIRSF:   PIRSF019307

Pfam domain/function: PF07883 Cupin_2; SSF51182 RmlC_like_cupin

EC number: NA

Molecular weight: Translated: 18336; Mature: 18336

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERETQTYFFPDDGRIPNHPDFPLVVYQNALKDTGLAERIVTRHGWSNSWSGSVFPYHHY
CCCCCCEEEECCCCCCCCCCCCCEEEEECHHCCCCHHHHHHHHCCCCCCCCCCCCEECCC
HSNTHEVLIALRREAVIQFGGEKGAAIPFKSGDAVVIPAGVGHKKLSSSPDFTVLGAYPG
CCCHHHHHHHHHHHHHEEECCCCCCCCEECCCCEEEEECCCCCHHCCCCCCEEEEECCCC
GVQYDMKTGKPNEREEAVKQIKQAALPANDPITGKREPLLEIWVK
CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MERETQTYFFPDDGRIPNHPDFPLVVYQNALKDTGLAERIVTRHGWSNSWSGSVFPYHHY
CCCCCCEEEECCCCCCCCCCCCCEEEEECHHCCCCHHHHHHHHCCCCCCCCCCCCEECCC
HSNTHEVLIALRREAVIQFGGEKGAAIPFKSGDAVVIPAGVGHKKLSSSPDFTVLGAYPG
CCCHHHHHHHHHHHHHEEECCCCCCCCEECCCCEEEEECCCCCHHCCCCCCEEEEECCCC
GVQYDMKTGKPNEREEAVKQIKQAALPANDPITGKREPLLEIWVK
CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377