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The map label for this gene is rex

Identifier: 16078293

GI number: 16078293

Start: 1298612

End: 1299034

Strand: Direct

Name: rex

Synonym: BSU12280

Alternate gene names: 16078293

Gene position: 1298612-1299034 (Clockwise)

Preceding gene: 16078292

Following gene: 16078294

Centisome position: 30.8

GC content: 43.5

Gene sequence:

>423_bases
ATGCCAGAAACAATCGATCAAACAAATGCGTCTGTCAGCCAAAGCCAGCAAGATCTTATTGATCAGCTATTAAAGCCAGA
AGTTCAAGAATCATTGACTGTTTTAGTTGACCAGCTTCCGAAGCTGACTGAGTTAGTGAATATTTTAACGAAGTCTTATG
ATTTCGCTCAGTCTGTAGCGACTGACGAAGTGTTAAAGAGCGACACAGTCGGTGCGATCACTGAAATTCTCGAGCCTGTA
AAAGAAACAGCGAAAGAAGTAGCTGCGACTGCGATCGAAGCAAAAGACCGCGCGGAAGCAAGCAACGAAACAATTGGACT
TTTCGGCCTTCTTCGCATGCTGAAAGATCCTCAAGCTCAAAAGCTGTTCCGTTTTGCTAACAGCTACCTTGAAGTCATGA
ACGAACGCGAAAACCAAAAATAA

Upstream 100 bases:

>100_bases
TCACAATCCTTATTCTTATGCCTTAAAAGCGTGAGACAGGGAGAGGCACTACCCTTTCCAAAAAAATCAGCAAACTGCTT
ATAGTAAAGGAGAATTGGAT

Downstream 100 bases:

>100_bases
TCTCAGATTCAAATTGATATAAAGGACGGAGGATATACGATGTCAAAACATATTGTCATTCTAGGCGCTGGTTATGGCGG
AGTTCTTTCTGCTCTAACAG

Product: transcriptional repressor of the rex ndh operon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPETIDQTNASVSQSQQDLIDQLLKPEVQESLTVLVDQLPKLTELVNILTKSYDFAQSVATDEVLKSDTVGAITEILEPV
KETAKEVAATAIEAKDRAEASNETIGLFGLLRMLKDPQAQKLFRFANSYLEVMNERENQK

Sequences:

>Translated_140_residues
MPETIDQTNASVSQSQQDLIDQLLKPEVQESLTVLVDQLPKLTELVNILTKSYDFAQSVATDEVLKSDTVGAITEILEPV
KETAKEVAATAIEAKDRAEASNETIGLFGLLRMLKDPQAQKLFRFANSYLEVMNERENQK
>Mature_139_residues
PETIDQTNASVSQSQQDLIDQLLKPEVQESLTVLVDQLPKLTELVNILTKSYDFAQSVATDEVLKSDTVGAITEILEPVK
ETAKEVAATAIEAKDRAEASNETIGLFGLLRMLKDPQAQKLFRFANSYLEVMNERENQK

Specific function: Unknown

COG id: COG2427

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJLC_BACSU (O34633)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   A69852
- RefSeq:   NP_389110.1
- ProteinModelPortal:   O34633
- EnsemblBacteria:   EBBACT00000000875
- GeneID:   939407
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12280
- NMPDR:   fig|224308.1.peg.1229
- GenoList:   BSU12280
- GeneTree:   EBGT00050000002570
- HOGENOM:   HBG337924
- OMA:   MPETIDQ
- ProtClustDB:   CLSK887105
- BioCyc:   BSUB:BSU12280-MONOMER
- InterPro:   IPR012440

Pfam domain/function: PF07849 DUF1641

EC number: NA

Molecular weight: Translated: 15583; Mature: 15452

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETIDQTNASVSQSQQDLIDQLLKPEVQESLTVLVDQLPKLTELVNILTKSYDFAQSVA
CCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDEVLKSDTVGAITEILEPVKETAKEVAATAIEAKDRAEASNETIGLFGLLRMLKDPQAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
KLFRFANSYLEVMNERENQK
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PETIDQTNASVSQSQQDLIDQLLKPEVQESLTVLVDQLPKLTELVNILTKSYDFAQSVA
CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDEVLKSDTVGAITEILEPVKETAKEVAATAIEAKDRAEASNETIGLFGLLRMLKDPQAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHH
KLFRFANSYLEVMNERENQK
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377