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The map label for this gene is oppA

Identifier: 16078208

GI number: 16078208

Start: 1219849

End: 1221486

Strand: Direct

Name: oppA

Synonym: BSU11430

Alternate gene names: 16078208

Gene position: 1219849-1221486 (Clockwise)

Preceding gene: 16078206

Following gene: 16078209

Centisome position: 28.94

GC content: 41.45

Gene sequence:

>1638_bases
ATGAAAAAACGTTGGTCGATTGTCACGTTGATGCTCATTTTCACTCTCGTGCTGAGCGCGTGCGGCTTTGGCGGCAGCGG
ATCAAACGGTGAAGGGAAAAAGGACAGTAAAGGAAAGACGACACTTAACATTAATATTAAAACTGAGCCGTTCTCCTTAC
ATCCGGGATTGGCAAATGATTCAGTATCAGGCGGTGTTATCCGTCAGACTTTTGAAGGATTGACACGTATCAATGCAGAT
GGTGAGCCTGAAGAAGGCATGGCTTCTAAAATTGAAACGAGCAAGGACGGAAAGACATATACATTTACCATTCGTGATGG
TGTGAAATGGTCTAATGGAGACCCTGTAACTGCACAAGATTTTGAATATGCTTGGAAATGGGCGCTTGACCCTAATAATG
AATCACAATACGCTTACCAGCTCTACTACATAAAAGGTGCTGAAGCGGCGAATACCGGAAAAGGCAGCCTAGACGATGTG
GCAGTAAAAGCTGTGAATGACAAAACGCTGAAGGTTGAATTAAATAACCCGACTCCATATTTCACTGAATTAACTGCGTT
CTATACGTATATGCCGATCAATAAGAAAATTGCAGAGAAAAATAAAAAGTGGAATACAAATGCCGGAGATGATTATGTAT
CAAACGGGCCGTTCAAAATGACGGCATGGAAACACAGCGGCTCTATTACTCTCGAAAAAAATGACCAGTATTGGGATAAA
GACAAAGTCAAACTGAAGAAAATCGATATGGTTATGATCAACAATAACAATACGGAACTAAAAAAATTCCAAGCTGGCGA
ACTTGATTGGGCCGGTATGCCGCTCGGACAGCTTCCGACAGAATCCCTGCCGACCCTGAAAAAAGACGGTTCTTTACATG
TTGAGCCGATTGCAGGAGTGTATTGGTACAAATTCAACACTGAAGCTAAGCCATTAGACAACGTCAATATCCGTAAAGCT
TTAACATATTCGCTTGACCGTCAGTCGATTGTTAAAAACGTTACGCAAGGAGAGCAAATCCCGGCAATGGCTGCAGTGCC
GCCTACAATGAAGGGATTTGAGGATAACAAAGAAGGATACTTCAAAGACAATGATGTCAAAACAGCAAAAGAATACCTTG
AAAAAGGCCTAAAAGAAATGGGCTTAAGCAAGGCATCTGATTTGCCAAAAATCAAATTGTCTTACAACACTGATGACGCA
CACGCGAAAATCGCTCAAGCAGTACAAGAAATGTGGAAGAAAAATTTAGGCGTTGATGTTGAGCTTGATAACTCAGAGTG
GAATGTCTATATTGATAAGCTCCACAGCCAAGATTATCAAATCGGCCGTATGGGCTGGCTCGGCGACTTCAATGATCCTA
TCAACTTCCTTGAATTGTTCCGCGACAAAAACGGAGGAAATAACGATACAGGCTGGGAAAATCCAGAATTCAAAAAGCTT
CTGAATCAGTCACAAACTGAAACAGATAAAACAAAACGTGCAGAGCTGCTGAAAAAAGCAGAAGGTATTTTCATTGATGA
AATGCCGGTTGCCCCAATCTATTTCTATACTGATACTTGGGTACAGGATGAAAACCTAAAAGGTGTTATCATGCCAGGTA
CTGGTGAGGTTTATTTCAGAAACGCATATTTTAAATAA

Upstream 100 bases:

>100_bases
GGAACAGAATAAAAGTTGTGGAAACTCAGGTTCATTTGTCTGATATTTCTGAGGATTTAGCCGTAAGGAGCTGAAAATTA
TTATTAGGGGGTTTGCGAAT

Downstream 100 bases:

>100_bases
GGCTACGTCTGAAAATAAAAGACCTCAAGGTATATGGGGAGAAAAGCCCCATATACCTTTCTTACTGATGGAGTATAAAA
ATGTAAAAACCATGGAGGTG

Product: oligopeptide ABC transporter binding lipoprotein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MKKRWSIVTLMLIFTLVLSACGFGGSGSNGEGKKDSKGKTTLNINIKTEPFSLHPGLANDSVSGGVIRQTFEGLTRINAD
GEPEEGMASKIETSKDGKTYTFTIRDGVKWSNGDPVTAQDFEYAWKWALDPNNESQYAYQLYYIKGAEAANTGKGSLDDV
AVKAVNDKTLKVELNNPTPYFTELTAFYTYMPINKKIAEKNKKWNTNAGDDYVSNGPFKMTAWKHSGSITLEKNDQYWDK
DKVKLKKIDMVMINNNNTELKKFQAGELDWAGMPLGQLPTESLPTLKKDGSLHVEPIAGVYWYKFNTEAKPLDNVNIRKA
LTYSLDRQSIVKNVTQGEQIPAMAAVPPTMKGFEDNKEGYFKDNDVKTAKEYLEKGLKEMGLSKASDLPKIKLSYNTDDA
HAKIAQAVQEMWKKNLGVDVELDNSEWNVYIDKLHSQDYQIGRMGWLGDFNDPINFLELFRDKNGGNNDTGWENPEFKKL
LNQSQTETDKTKRAELLKKAEGIFIDEMPVAPIYFYTDTWVQDENLKGVIMPGTGEVYFRNAYFK

Sequences:

>Translated_545_residues
MKKRWSIVTLMLIFTLVLSACGFGGSGSNGEGKKDSKGKTTLNINIKTEPFSLHPGLANDSVSGGVIRQTFEGLTRINAD
GEPEEGMASKIETSKDGKTYTFTIRDGVKWSNGDPVTAQDFEYAWKWALDPNNESQYAYQLYYIKGAEAANTGKGSLDDV
AVKAVNDKTLKVELNNPTPYFTELTAFYTYMPINKKIAEKNKKWNTNAGDDYVSNGPFKMTAWKHSGSITLEKNDQYWDK
DKVKLKKIDMVMINNNNTELKKFQAGELDWAGMPLGQLPTESLPTLKKDGSLHVEPIAGVYWYKFNTEAKPLDNVNIRKA
LTYSLDRQSIVKNVTQGEQIPAMAAVPPTMKGFEDNKEGYFKDNDVKTAKEYLEKGLKEMGLSKASDLPKIKLSYNTDDA
HAKIAQAVQEMWKKNLGVDVELDNSEWNVYIDKLHSQDYQIGRMGWLGDFNDPINFLELFRDKNGGNNDTGWENPEFKKL
LNQSQTETDKTKRAELLKKAEGIFIDEMPVAPIYFYTDTWVQDENLKGVIMPGTGEVYFRNAYFK
>Mature_545_residues
MKKRWSIVTLMLIFTLVLSACGFGGSGSNGEGKKDSKGKTTLNINIKTEPFSLHPGLANDSVSGGVIRQTFEGLTRINAD
GEPEEGMASKIETSKDGKTYTFTIRDGVKWSNGDPVTAQDFEYAWKWALDPNNESQYAYQLYYIKGAEAANTGKGSLDDV
AVKAVNDKTLKVELNNPTPYFTELTAFYTYMPINKKIAEKNKKWNTNAGDDYVSNGPFKMTAWKHSGSITLEKNDQYWDK
DKVKLKKIDMVMINNNNTELKKFQAGELDWAGMPLGQLPTESLPTLKKDGSLHVEPIAGVYWYKFNTEAKPLDNVNIRKA
LTYSLDRQSIVKNVTQGEQIPAMAAVPPTMKGFEDNKEGYFKDNDVKTAKEYLEKGLKEMGLSKASDLPKIKLSYNTDDA
HAKIAQAVQEMWKKNLGVDVELDNSEWNVYIDKLHSQDYQIGRMGWLGDFNDPINFLELFRDKNGGNNDTGWENPEFKKL
LNQSQTETDKTKRAELLKKAEGIFIDEMPVAPIYFYTDTWVQDENLKGVIMPGTGEVYFRNAYFK

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=559, Percent_Identity=34.525939177102, Blast_Score=281, Evalue=6e-77,
Organism=Escherichia coli, GI1787495, Length=485, Percent_Identity=34.2268041237113, Blast_Score=273, Evalue=1e-74,
Organism=Escherichia coli, GI1789397, Length=482, Percent_Identity=31.9502074688797, Blast_Score=258, Evalue=9e-70,
Organism=Escherichia coli, GI1789966, Length=474, Percent_Identity=27.8481012658228, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI1787762, Length=516, Percent_Identity=24.4186046511628, Blast_Score=118, Evalue=9e-28,
Organism=Escherichia coli, GI1787052, Length=534, Percent_Identity=24.5318352059925, Blast_Score=111, Evalue=9e-26,
Organism=Escherichia coli, GI1789887, Length=489, Percent_Identity=24.9488752556237, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787551, Length=472, Percent_Identity=21.6101694915254, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61492; Mature: 61492

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRWSIVTLMLIFTLVLSACGFGGSGSNGEGKKDSKGKTTLNINIKTEPFSLHPGLAND
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCCC
SVSGGVIRQTFEGLTRINADGEPEEGMASKIETSKDGKTYTFTIRDGVKWSNGDPVTAQD
CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCEECCCCCCCCCC
FEYAWKWALDPNNESQYAYQLYYIKGAEAANTGKGSLDDVAVKAVNDKTLKVELNNPTPY
CCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCC
FTELTAFYTYMPINKKIAEKNKKWNTNAGDDYVSNGPFKMTAWKHSGSITLEKNDQYWDK
HHHHEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCC
DKVKLKKIDMVMINNNNTELKKFQAGELDWAGMPLGQLPTESLPTLKKDGSLHVEPIAGV
CCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEE
YWYKFNTEAKPLDNVNIRKALTYSLDRQSIVKNVTQGEQIPAMAAVPPTMKGFEDNKEGY
EEEEECCCCCCCCCCCHHHHEEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCC
FKDNDVKTAKEYLEKGLKEMGLSKASDLPKIKLSYNTDDAHAKIAQAVQEMWKKNLGVDV
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEE
ELDNSEWNVYIDKLHSQDYQIGRMGWLGDFNDPINFLELFRDKNGGNNDTGWENPEFKKL
EECCCCCEEEEEEECCCCCEEECEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LNQSQTETDKTKRAELLKKAEGIFIDEMPVAPIYFYTDTWVQDENLKGVIMPGTGEVYFR
HCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEECCCCCEEEECCCCCEEEE
NAYFK
EECCC
>Mature Secondary Structure
MKKRWSIVTLMLIFTLVLSACGFGGSGSNGEGKKDSKGKTTLNINIKTEPFSLHPGLAND
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCCC
SVSGGVIRQTFEGLTRINADGEPEEGMASKIETSKDGKTYTFTIRDGVKWSNGDPVTAQD
CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCEECCCCCCCCCC
FEYAWKWALDPNNESQYAYQLYYIKGAEAANTGKGSLDDVAVKAVNDKTLKVELNNPTPY
CCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCC
FTELTAFYTYMPINKKIAEKNKKWNTNAGDDYVSNGPFKMTAWKHSGSITLEKNDQYWDK
HHHHEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCC
DKVKLKKIDMVMINNNNTELKKFQAGELDWAGMPLGQLPTESLPTLKKDGSLHVEPIAGV
CCEEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEE
YWYKFNTEAKPLDNVNIRKALTYSLDRQSIVKNVTQGEQIPAMAAVPPTMKGFEDNKEGY
EEEEECCCCCCCCCCCHHHHEEECCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCC
FKDNDVKTAKEYLEKGLKEMGLSKASDLPKIKLSYNTDDAHAKIAQAVQEMWKKNLGVDV
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEE
ELDNSEWNVYIDKLHSQDYQIGRMGWLGDFNDPINFLELFRDKNGGNNDTGWENPEFKKL
EECCCCCEEEEEEECCCCCEEECEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
LNQSQTETDKTKRAELLKKAEGIFIDEMPVAPIYFYTDTWVQDENLKGVIMPGTGEVYFR
HCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEECCCCCEEEECCCCCEEEE
NAYFK
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]