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The map label for this gene is yjbA

Identifier: 16078206

GI number: 16078206

Start: 1217326

End: 1218078

Strand: Direct

Name: yjbA

Synonym: BSU11410

Alternate gene names: NA

Gene position: 1217326-1218078 (Clockwise)

Preceding gene: 16078205

Following gene: 16078208

Centisome position: 28.88

GC content: 41.83

Gene sequence:

>753_bases
ATGTTATTTCTTCATGATGTGTGGGTCAATTGGTTTGAAGGGGAAGAAAATGGCTACAATGTATGCCACTTTCACGAATG
GCGCAAGGAAGATACGGTTGAGCTTTTGGATCAGGTGCCGCTGTTAAGGGTGCCGTCAGTACTGTTTCATTACATAGAAA
ACGATTTGTCAGAGCTTCCGAAAGGTTTGCTTGAAGACGTACATCAGAAATCGTACATTCGAAAAAATCATGAGCGGACA
AAGCTTGAGTATTGTTTTGTCGTAACAGACGGAATCGGCATTTTAGCTGTTGACACGATCGGCTACACGATCCCTGTCAG
AAAAAGCCGTCTAATCCCAAGACAGGAGCAGCTCGTTTATGAAATGGTAAAAGATGTAGAGCCTGAAACATATGAATTTG
AGCCAAAGAAGCTGGAATCCTCCAAGGAATATCACATCTTATCATTAGCACCAGAACATGTCAGAGGACTGACAAGAAAA
GAACGGCAAATTAAGCAGCTGATGTTTATGGCGCTTGACCAATTAAAAGGGCTGAAAAACCGAGCGGAAATTGGCTACTG
GTACACAGAGTGGAATCCGCATATGTATGAACAAATCAAAAGGATGAGCTTTGAAGAGATTTGGGACATGCTGTATAACG
AAACAATTGAAGGCTGGTCGGACAAACACCTAGCTTTTTGCGAAAACCTAATAAAAGGACAGCCTTTTTTCGAAAAGCTT
TGGGAAATGGAAAACGAATCAAAGGTCAACTGA

Upstream 100 bases:

>100_bases
AAACCCAGTGATTCCAGATTTCCTCAATCTCTTTGGAATAATTTCTCTATCCCTTGCCTATACTGTGGACAACAGTTTTT
ATAAAAGTGAGGGGTTAGAG

Downstream 100 bases:

>100_bases
AAAAAACCGCTCTTTGCAAAGAGCGGTTTTTTGATTAGCGTCTTTTTCTTCCAAGACCCATGGCATTCTCCATTTTTTTC
AGCATTTTGTTTGCTGTCCG

Product: nucleic acid binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDTVELLDQVPLLRVPSVLFHYIENDLSELPKGLLEDVHQKSYIRKNHERT
KLEYCFVVTDGIGILAVDTIGYTIPVRKSRLIPRQEQLVYEMVKDVEPETYEFEPKKLESSKEYHILSLAPEHVRGLTRK
ERQIKQLMFMALDQLKGLKNRAEIGYWYTEWNPHMYEQIKRMSFEEIWDMLYNETIEGWSDKHLAFCENLIKGQPFFEKL
WEMENESKVN

Sequences:

>Translated_250_residues
MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDTVELLDQVPLLRVPSVLFHYIENDLSELPKGLLEDVHQKSYIRKNHERT
KLEYCFVVTDGIGILAVDTIGYTIPVRKSRLIPRQEQLVYEMVKDVEPETYEFEPKKLESSKEYHILSLAPEHVRGLTRK
ERQIKQLMFMALDQLKGLKNRAEIGYWYTEWNPHMYEQIKRMSFEEIWDMLYNETIEGWSDKHLAFCENLIKGQPFFEKL
WEMENESKVN
>Mature_250_residues
MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDTVELLDQVPLLRVPSVLFHYIENDLSELPKGLLEDVHQKSYIRKNHERT
KLEYCFVVTDGIGILAVDTIGYTIPVRKSRLIPRQEQLVYEMVKDVEPETYEFEPKKLESSKEYHILSLAPEHVRGLTRK
ERQIKQLMFMALDQLKGLKNRAEIGYWYTEWNPHMYEQIKRMSFEEIWDMLYNETIEGWSDKHLAFCENLIKGQPFFEKL
WEMENESKVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0736 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020909 [H]

Pfam domain/function: PF12227 DUF3603 [H]

EC number: NA

Molecular weight: Translated: 30120; Mature: 30120

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDTVELLDQVPLLRVPSVLFHYIENDLSELP
CEEEEEEHHHHCCCCCCCCCEEEEHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KGLLEDVHQKSYIRKNHERTKLEYCFVVTDGIGILAVDTIGYTIPVRKSRLIPRQEQLVY
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCCCEECCHHHHCCCHHHHHHH
EMVKDVEPETYEFEPKKLESSKEYHILSLAPEHVRGLTRKERQIKQLMFMALDQLKGLKN
HHHHCCCCCCCCCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RAEIGYWYTEWNPHMYEQIKRMSFEEIWDMLYNETIEGWSDKHLAFCENLIKGQPFFEKL
HHHCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH
WEMENESKVN
HCCCCCCCCC
>Mature Secondary Structure
MLFLHDVWVNWFEGEENGYNVCHFHEWRKEDTVELLDQVPLLRVPSVLFHYIENDLSELP
CEEEEEEHHHHCCCCCCCCCEEEEHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
KGLLEDVHQKSYIRKNHERTKLEYCFVVTDGIGILAVDTIGYTIPVRKSRLIPRQEQLVY
HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEECCCCCEECCHHHHCCCHHHHHHH
EMVKDVEPETYEFEPKKLESSKEYHILSLAPEHVRGLTRKERQIKQLMFMALDQLKGLKN
HHHHCCCCCCCCCCHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RAEIGYWYTEWNPHMYEQIKRMSFEEIWDMLYNETIEGWSDKHLAFCENLIKGQPFFEKL
HHHCCEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHH
WEMENESKVN
HCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA