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The map label for this gene is gerPD

Identifier: 16078133

GI number: 16078133

Start: 1149145

End: 1149321

Strand: Reverse

Name: gerPD

Synonym: BSU10690

Alternate gene names: 16078133

Gene position: 1149321-1149145 (Counterclockwise)

Preceding gene: 16078134

Following gene: 16078132

Centisome position: 27.26

GC content: 46.89

Gene sequence:

>177_bases
ATGATCTTTACAGTCATCAACCGCAGCTTGGAAGTCGGGGATATTCGGATGAACGGTGTGTCCAGTTCCTCCGTTTTCCA
CATCGGAGACACTGAATCCATCTACCTGTCTTCTATTTTTGATACACCGCCTGAATCTCTTATTATTGGGCCGTTTGCTC
CGCTTGCGCCAGAATAA

Upstream 100 bases:

>100_bases
ATGCAGAACATATCGCTGAGCATGTGAAGCGTGATGTCATCCGCGCTGTAGAACACTTTCTGGAGCATATTCCATCAGAA
ATGAAAGGAGATGAGCAAGC

Downstream 100 bases:

>100_bases
TGCTTAAACGCATATCGCGCATCAGACTAGTTAAGTTTAATTCTCTCGGGATCGCAAGTGTGTTTCAAGTTGGCGACACA
AATGAAATCGATATGAGTGT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MIFTVINRSLEVGDIRMNGVSSSSVFHIGDTESIYLSSIFDTPPESLIIGPFAPLAPE

Sequences:

>Translated_58_residues
MIFTVINRSLEVGDIRMNGVSSSSVFHIGDTESIYLSSIFDTPPESLIIGPFAPLAPE
>Mature_58_residues
MIFTVINRSLEVGDIRMNGVSSSSVFHIGDTESIYLSSIFDTPPESLIIGPFAPLAPE

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERPD_BACSU (O06718)

Other databases:

- EMBL:   Y09476
- EMBL:   AL009126
- PIR:   E69836
- RefSeq:   NP_388950.1
- EnsemblBacteria:   EBBACT00000003032
- GeneID:   936349
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10690
- NMPDR:   fig|224308.1.peg.1069
- GenoList:   BSU10690
- GeneTree:   EBGT00050000002178
- HOGENOM:   HBG313751
- OMA:   ESLIIGP
- ProtClustDB:   CLSK2752361
- BioCyc:   BSUB:BSU10690-MONOMER
- InterPro:   IPR017257
- PIRSF:   PIRSF037666

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6269; Mature: 6269

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTVINRSLEVGDIRMNGVSSSSVFHIGDTESIYLSSIFDTPPESLIIGPFAPLAPE
CEEEEECCCEEECEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MIFTVINRSLEVGDIRMNGVSSSSVFHIGDTESIYLSSIFDTPPESLIIGPFAPLAPE
CEEEEECCCEEECEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 10715007