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The map label for this gene is gerPC

Identifier: 16078134

GI number: 16078134

Start: 1149318

End: 1149935

Strand: Reverse

Name: gerPC

Synonym: BSU10700

Alternate gene names: 16078134

Gene position: 1149935-1149318 (Counterclockwise)

Preceding gene: 16078135

Following gene: 16078133

Centisome position: 27.28

GC content: 44.01

Gene sequence:

>618_bases
ATGTATGATCAATCTGTTTCCTCTTACCTGCAAAACTTGAATTCCTTCGTTCAGCAGCAGGCGATTCACATTCAGCAGCT
CGAACGTCAGCTGAAAGAGATTCAAACTGAAATGAATACGATGAAACAGCGGCCGGCCACTACCATTGAGCGTGTGGAGT
ATAAATTTGATCAGCTGAAAATCGAAAGGCTCGACGGGACTTTGAATATCGGTTTAAATCCGACTGACCCGAACAGCGTC
CAAAACTTTGACGTCAGCCAGTCGACACCGCAAATCGGGATGATGCAGCAGGAAGAGAGCGCTCAGCTCATGCAGCAGAT
CCGCCAGAATGTCGACATGTACTTAACCGAGGAAATCCCAGATATTTTGGAACAGCTTGAAAATCAATATGACAGCAGAC
TTGACGATACAAACAGACATCATGTTATTGAAGACATCAGAAAACAAATGGACAGCAGGATTCACTATTATATGTCCCAT
ATCAAAAAAGAAGAAAATACACCGCCTGCACAATATGCAGAACATATCGCTGAGCATGTGAAGCGTGATGTCATCCGCGC
TGTAGAACACTTTCTGGAGCATATTCCATCAGAAATGAAAGGAGATGAGCAAGCATGA

Upstream 100 bases:

>100_bases
TCTGGCTCAGGGCAACCGCTCCAGCTGCAGGAGCCCGACACAGGTTCATTGGTCCCGCTCCAGCCTCCTGGCCGTTAATC
ATATGAAAGAGGTGAAGAAC

Downstream 100 bases:

>100_bases
TCTTTACAGTCATCAACCGCAGCTTGGAAGTCGGGGATATTCGGATGAACGGTGTGTCCAGTTCCTCCGTTTTCCACATC
GGAGACACTGAATCCATCTA

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MYDQSVSSYLQNLNSFVQQQAIHIQQLERQLKEIQTEMNTMKQRPATTIERVEYKFDQLKIERLDGTLNIGLNPTDPNSV
QNFDVSQSTPQIGMMQQEESAQLMQQIRQNVDMYLTEEIPDILEQLENQYDSRLDDTNRHHVIEDIRKQMDSRIHYYMSH
IKKEENTPPAQYAEHIAEHVKRDVIRAVEHFLEHIPSEMKGDEQA

Sequences:

>Translated_205_residues
MYDQSVSSYLQNLNSFVQQQAIHIQQLERQLKEIQTEMNTMKQRPATTIERVEYKFDQLKIERLDGTLNIGLNPTDPNSV
QNFDVSQSTPQIGMMQQEESAQLMQQIRQNVDMYLTEEIPDILEQLENQYDSRLDDTNRHHVIEDIRKQMDSRIHYYMSH
IKKEENTPPAQYAEHIAEHVKRDVIRAVEHFLEHIPSEMKGDEQA
>Mature_205_residues
MYDQSVSSYLQNLNSFVQQQAIHIQQLERQLKEIQTEMNTMKQRPATTIERVEYKFDQLKIERLDGTLNIGLNPTDPNSV
QNFDVSQSTPQIGMMQQEESAQLMQQIRQNVDMYLTEEIPDILEQLENQYDSRLDDTNRHHVIEDIRKQMDSRIHYYMSH
IKKEENTPPAQYAEHIAEHVKRDVIRAVEHFLEHIPSEMKGDEQA

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERPC_BACSU (O06719)

Other databases:

- EMBL:   Y09476
- EMBL:   AL009126
- PIR:   F69836
- RefSeq:   NP_388951.1
- EnsemblBacteria:   EBBACT00000000600
- GeneID:   939327
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10700
- NMPDR:   fig|224308.1.peg.1070
- GenoList:   BSU10700
- GeneTree:   EBGT00050000001386
- HOGENOM:   HBG313750
- OMA:   EGTLNIG
- ProtClustDB:   CLSK887031
- BioCyc:   BSUB:BSU10700-MONOMER
- InterPro:   IPR019673

Pfam domain/function: PF10737 GerPC

EC number: NA

Molecular weight: Translated: 24240; Mature: 24240

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDQSVSSYLQNLNSFVQQQAIHIQQLERQLKEIQTEMNTMKQRPATTIERVEYKFDQLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IERLDGTLNIGLNPTDPNSVQNFDVSQSTPQIGMMQQEESAQLMQQIRQNVDMYLTEEIP
HHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DILEQLENQYDSRLDDTNRHHVIEDIRKQMDSRIHYYMSHIKKEENTPPAQYAEHIAEHV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KRDVIRAVEHFLEHIPSEMKGDEQA
HHHHHHHHHHHHHHCCHHCCCCCCC
>Mature Secondary Structure
MYDQSVSSYLQNLNSFVQQQAIHIQQLERQLKEIQTEMNTMKQRPATTIERVEYKFDQLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IERLDGTLNIGLNPTDPNSVQNFDVSQSTPQIGMMQQEESAQLMQQIRQNVDMYLTEEIP
HHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
DILEQLENQYDSRLDDTNRHHVIEDIRKQMDSRIHYYMSHIKKEENTPPAQYAEHIAEHV
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KRDVIRAVEHFLEHIPSEMKGDEQA
HHHHHHHHHHHHHHCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 10715007