Click here to switch to the map view.

The map label for this gene is gerPE

Identifier: 16078132

GI number: 16078132

Start: 1148744

End: 1149145

Strand: Reverse

Name: gerPE

Synonym: BSU10680

Alternate gene names: 16078132

Gene position: 1149145-1148744 (Counterclockwise)

Preceding gene: 16078133

Following gene: 16078131

Centisome position: 27.26

GC content: 46.02

Gene sequence:

>402_bases
ATGCTTAAACGCATATCGCGCATCAGACTAGTTAAGTTTAATTCTCTCGGGATCGCAAGTGTGTTTCAAGTTGGCGACAC
AAATGAAATCGATATGAGTGTAAAAGTATTTGCTGTGCAGCGTTCTCTGTCCACGTTTTACCATAATGAAGGCTCATTTA
ACAAAAAGGAGTATCAGATCTTTCAGCAGCAGGCCGTGAAGCCGCTCCCCGAAACAGGTGTACAAAGCGCGTTTTGCCAC
GAGGTGCCGGCTATTTATGTTCGCAGCATCAAAATTCAAGGGGTCTCAGCCTCTTCTGTTTTACATGCCGGATCAGCTTC
GCTTATTCGCGGTGATGCGAGACTCAAACATATCAGACAGATTCAGTCTCCGCGCTCACAATCGCCCGCCAAGAACATAT
AA

Upstream 100 bases:

>100_bases
TCCACATCGGAGACACTGAATCCATCTACCTGTCTTCTATTTTTGATACACCGCCTGAATCTCTTATTATTGGGCCGTTT
GCTCCGCTTGCGCCAGAATA

Downstream 100 bases:

>100_bases
TAAACAGAGACTTCGATAAAGGGTGTCGTTTATGCCAGCAATTGTCGGGCCTATAGCTATCAATTCCATATCGGGCGGAG
TCGTAAACTTTGGTGATTCC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLKRISRIRLVKFNSLGIASVFQVGDTNEIDMSVKVFAVQRSLSTFYHNEGSFNKKEYQIFQQQAVKPLPETGVQSAFCH
EVPAIYVRSIKIQGVSASSVLHAGSASLIRGDARLKHIRQIQSPRSQSPAKNI

Sequences:

>Translated_133_residues
MLKRISRIRLVKFNSLGIASVFQVGDTNEIDMSVKVFAVQRSLSTFYHNEGSFNKKEYQIFQQQAVKPLPETGVQSAFCH
EVPAIYVRSIKIQGVSASSVLHAGSASLIRGDARLKHIRQIQSPRSQSPAKNI
>Mature_133_residues
MLKRISRIRLVKFNSLGIASVFQVGDTNEIDMSVKVFAVQRSLSTFYHNEGSFNKKEYQIFQQQAVKPLPETGVQSAFCH
EVPAIYVRSIKIQGVSASSVLHAGSASLIRGDARLKHIRQIQSPRSQSPAKNI

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERPE_BACSU (O06717)

Other databases:

- EMBL:   Y09476
- EMBL:   AL009126
- PIR:   D69836
- RefSeq:   NP_388949.1
- ProteinModelPortal:   O06717
- EnsemblBacteria:   EBBACT00000003307
- GeneID:   939782
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU10680
- NMPDR:   fig|224308.1.peg.1068
- GenoList:   BSU10680
- GeneTree:   EBGT00050000002733
- HOGENOM:   HBG363675
- OMA:   DEHITIP
- ProtClustDB:   CLSK2393376
- BioCyc:   BSUB:BSU10680-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14814; Mature: 14814

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRISRIRLVKFNSLGIASVFQVGDTNEIDMSVKVFAVQRSLSTFYHNEGSFNKKEYQI
CCCCCCCEEEEEECCCCHHHHEECCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHH
FQQQAVKPLPETGVQSAFCHEVPAIYVRSIKIQGVSASSVLHAGSASLIRGDARLKHIRQ
HHHHHCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCCHHHEHHHHHHHHHH
IQSPRSQSPAKNI
HCCCCCCCCCCCC
>Mature Secondary Structure
MLKRISRIRLVKFNSLGIASVFQVGDTNEIDMSVKVFAVQRSLSTFYHNEGSFNKKEYQI
CCCCCCCEEEEEECCCCHHHHEECCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHH
FQQQAVKPLPETGVQSAFCHEVPAIYVRSIKIQGVSASSVLHAGSASLIRGDARLKHIRQ
HHHHHCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHCCCCHHHEHHHHHHHHHH
IQSPRSQSPAKNI
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 10715007