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The map label for this gene is gerPF

Identifier: 16078131

GI number: 16078131

Start: 1148494

End: 1148721

Strand: Reverse

Name: gerPF

Synonym: BSU10670

Alternate gene names: 16078131

Gene position: 1148721-1148494 (Counterclockwise)

Preceding gene: 16078132

Following gene: 16078125

Centisome position: 27.25

GC content: 44.3

Gene sequence:

>228_bases
GTGTCGTTTATGCCAGCAATTGTCGGGCCTATAGCTATCAATTCCATATCGGGCGGAGTCGTAAACTTTGGTGATTCCTT
TTACCTTTCTCCGAAAAGCTCTTCAAAATCTGCGCTCGGTTCGGGAGCAGGAAACACGGGAGATTTCCTTCTATTAAATA
ATGCAGTCAACGCGACAAATTATATAGACCCCGATGTCAACGATCAGGATATGGTTGGAAACGGATAA

Upstream 100 bases:

>100_bases
ATTCGCGGTGATGCGAGACTCAAACATATCAGACAGATTCAGTCTCCGCGCTCACAATCGCCCGCCAAGAACATATAATA
AACAGAGACTTCGATAAAGG

Downstream 100 bases:

>100_bases
AAGCAGCCGCTCTGCAAAGAGAGGGCTGCTTTTTAGTCATTTTTTCTTTTTTCGTTCATTTGATTTCTTAGTTTTGATCA
GCTTCTCAGGCGGCTGTTTT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 74

Protein sequence:

>75_residues
MSFMPAIVGPIAINSISGGVVNFGDSFYLSPKSSSKSALGSGAGNTGDFLLLNNAVNATNYIDPDVNDQDMVGNG

Sequences:

>Translated_75_residues
MSFMPAIVGPIAINSISGGVVNFGDSFYLSPKSSSKSALGSGAGNTGDFLLLNNAVNATNYIDPDVNDQDMVGNG
>Mature_74_residues
SFMPAIVGPIAINSISGGVVNFGDSFYLSPKSSSKSALGSGAGNTGDFLLLNNAVNATNYIDPDVNDQDMVGNG

Specific function: Required for the formation of functionally normal spores. Could be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerPA/gerPF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019618 [H]

Pfam domain/function: PF10676 gerPA [H]

EC number: NA

Molecular weight: Translated: 7614; Mature: 7482

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFMPAIVGPIAINSISGGVVNFGDSFYLSPKSSSKSALGSGAGNTGDFLLLNNAVNATN
CCCCCCCCCCEEECCCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
YIDPDVNDQDMVGNG
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFMPAIVGPIAINSISGGVVNFGDSFYLSPKSSSKSALGSGAGNTGDFLLLNNAVNATN
CCCCCCCCCEEECCCCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
YIDPDVNDQDMVGNG
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 10715007 [H]