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The map label for this gene is yfiY

Identifier: 16077911

GI number: 16077911

Start: 919366

End: 920343

Strand: Reverse

Name: yfiY

Synonym: BSU08440

Alternate gene names: 16077911

Gene position: 920343-919366 (Counterclockwise)

Preceding gene: 16077916

Following gene: 16077908

Centisome position: 21.83

GC content: 42.02

Gene sequence:

>978_bases
ATGAAAAAGCATATCAGCATGCTATTCGTATTTTTAATGGCCGTTATGGTACTTTCTGCCTGTAATAGTTCAGAAAGTTC
AAGCAACAGCGAGGTGTCAAGCAGCAAAACAAGAACGGTCAAACATGCAATGGGGACATCAGACAACATCCCCGCCAATC
CAAAACGGATTGTTGTTTTAACTAATGAAGGAACAGAGGCGCTCTTAGCGCTTGGCATTAAGCCGGTCGGAGCCGTAAAG
TCATGGAAGGGCGACCCGTGGTATGACTATCTGAAAGATGACATGAAAGGTGTTAAAAACGTCGGTCTTGAAACGGAACC
GAATGTGGAAGCCATCGCAGAATTAAAGCCTGATTTGATTATTGGAAACAAAGTGCGCCAGGAAAAAATTTATGATCAGT
TAAATGCGATTGCGCCGACTGTTTTTGCTGAATCTTTGGCCGGGAACTGGAAGGATAACCTGACTCTATACGCCAACGCG
GTGAATAAGGCGGACAAAGGCAAGGAAGTCATTGCCGATTTTGATAAACGTGTTTCTGATTTAAAAAACAAGCTGGGCGA
CCAGACAAACAAAACCGTTTCAGTCGTACGCTTTTTATCCGGTGAATCAAGAATCTATTATACCGATTCATTTCCTGGGA
TTATTTTAGACCAGCTTGGCTTCAAACGCCCTGAAAAACAAGTGGAACTGTTTAAGAAACAAAAGGACCAATTTACGTTC
TCAACCGACAGTAAAGAATCTATTCCTGATATGGATGCTGATGTGCTGTTTTATTTCACTTATAAAGCCGATAATGCAAA
AGAAAATGAAAAATGGGCCAATCAGTGGACAAGCAGTTCACTATGGAAAAACCTGAAGGCCGTGAAGTCAGGTAATGCAC
ATGAAGTCGATGACGTCGTATGGACAACCGCAGGCGGAATTAAAGCCGCAAACTACCTGCTTGATGATATTGAAACCTAC
TTCTTAAAAACGAAATAA

Upstream 100 bases:

>100_bases
ATGTTTGTTTTTGAGAATAATCCTCAATTAGGGATTGACACTCTTAACACTGCTTATTATGATCTAAATGATAATGAATT
TCAATATTGGGAGGAAAAAG

Downstream 100 bases:

>100_bases
AAAAAGACTCCGTCTTATTAGACGGAGTCTTTTTTGCTTTTGCCAATCAGACGTGTAACGAGGAACATGGTGACAGAAAG
AGATCTGTTTTTCCGATACG

Product: iron(III) dicitrate transporter binding lipoprotein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKKHISMLFVFLMAVMVLSACNSSESSSNSEVSSSKTRTVKHAMGTSDNIPANPKRIVVLTNEGTEALLALGIKPVGAVK
SWKGDPWYDYLKDDMKGVKNVGLETEPNVEAIAELKPDLIIGNKVRQEKIYDQLNAIAPTVFAESLAGNWKDNLTLYANA
VNKADKGKEVIADFDKRVSDLKNKLGDQTNKTVSVVRFLSGESRIYYTDSFPGIILDQLGFKRPEKQVELFKKQKDQFTF
STDSKESIPDMDADVLFYFTYKADNAKENEKWANQWTSSSLWKNLKAVKSGNAHEVDDVVWTTAGGIKAANYLLDDIETY
FLKTK

Sequences:

>Translated_325_residues
MKKHISMLFVFLMAVMVLSACNSSESSSNSEVSSSKTRTVKHAMGTSDNIPANPKRIVVLTNEGTEALLALGIKPVGAVK
SWKGDPWYDYLKDDMKGVKNVGLETEPNVEAIAELKPDLIIGNKVRQEKIYDQLNAIAPTVFAESLAGNWKDNLTLYANA
VNKADKGKEVIADFDKRVSDLKNKLGDQTNKTVSVVRFLSGESRIYYTDSFPGIILDQLGFKRPEKQVELFKKQKDQFTF
STDSKESIPDMDADVLFYFTYKADNAKENEKWANQWTSSSLWKNLKAVKSGNAHEVDDVVWTTAGGIKAANYLLDDIETY
FLKTK
>Mature_325_residues
MKKHISMLFVFLMAVMVLSACNSSESSSNSEVSSSKTRTVKHAMGTSDNIPANPKRIVVLTNEGTEALLALGIKPVGAVK
SWKGDPWYDYLKDDMKGVKNVGLETEPNVEAIAELKPDLIIGNKVRQEKIYDQLNAIAPTVFAESLAGNWKDNLTLYANA
VNKADKGKEVIADFDKRVSDLKNKLGDQTNKTVSVVRFLSGESRIYYTDSFPGIILDQLGFKRPEKQVELFKKQKDQFTF
STDSKESIPDMDADVLFYFTYKADNAKENEKWANQWTSSSLWKNLKAVKSGNAHEVDDVVWTTAGGIKAANYLLDDIETY
FLKTK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable)

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain

Homologues:

Organism=Escherichia coli, GI87082411, Length=295, Percent_Identity=24.7457627118644, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFIY_BACSU (O31567)

Other databases:

- EMBL:   D85082
- EMBL:   AL009126
- PIR:   C69805
- RefSeq:   NP_388725.1
- ProteinModelPortal:   O31567
- SMR:   O31567
- PhosSite:   O31567
- EnsemblBacteria:   EBBACT00000002299
- GeneID:   939206
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08440
- NMPDR:   fig|224308.1.peg.844
- GenoList:   BSU08440
- GeneTree:   EBGT00070000031812
- HOGENOM:   HBG692908
- OMA:   REITHAM
- PhylomeDB:   O31567
- ProtClustDB:   CLSK2460898
- BioCyc:   BSUB:BSU08440-MONOMER
- GO:   GO:0005737
- InterPro:   IPR002491

Pfam domain/function: PF01497 Peripla_BP_2

EC number: NA

Molecular weight: Translated: 36305; Mature: 36305

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50983 FE_B12_PBP; PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHISMLFVFLMAVMVLSACNSSESSSNSEVSSSKTRTVKHAMGTSDNIPANPKRIVVL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
TNEGTEALLALGIKPVGAVKSWKGDPWYDYLKDDMKGVKNVGLETEPNVEAIAELKPDLI
ECCCCHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEE
IGNKVRQEKIYDQLNAIAPTVFAESLAGNWKDNLTLYANAVNKADKGKEVIADFDKRVSD
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LKNKLGDQTNKTVSVVRFLSGESRIYYTDSFPGIILDQLGFKRPEKQVELFKKQKDQFTF
HHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHCEEE
STDSKESIPDMDADVLFYFTYKADNAKENEKWANQWTSSSLWKNLKAVKSGNAHEVDDVV
CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WTTAGGIKAANYLLDDIETYFLKTK
EECCCCHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKKHISMLFVFLMAVMVLSACNSSESSSNSEVSSSKTRTVKHAMGTSDNIPANPKRIVVL
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
TNEGTEALLALGIKPVGAVKSWKGDPWYDYLKDDMKGVKNVGLETEPNVEAIAELKPDLI
ECCCCHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEE
IGNKVRQEKIYDQLNAIAPTVFAESLAGNWKDNLTLYANAVNKADKGKEVIADFDKRVSD
ECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LKNKLGDQTNKTVSVVRFLSGESRIYYTDSFPGIILDQLGFKRPEKQVELFKKQKDQFTF
HHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHCEEE
STDSKESIPDMDADVLFYFTYKADNAKENEKWANQWTSSSLWKNLKAVKSGNAHEVDDVV
CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WTTAGGIKAANYLLDDIETYFLKTK
EECCCCHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377