Click here to switch to the map view.

The map label for this gene is yfhD

Identifier: 16077916

GI number: 16077916

Start: 924210

End: 924401

Strand: Reverse

Name: yfhD

Synonym: BSU08490

Alternate gene names: 16077916

Gene position: 924401-924210 (Counterclockwise)

Preceding gene: 16077917

Following gene: 16077911

Centisome position: 21.93

GC content: 44.79

Gene sequence:

>192_bases
ATGGGCAGAAATCATATCCACAAAAACCGTGATAAAAACAAACAAAAGCTTCCACAAGTTCCCGATGCCTTAAAAAGGGA
AACTGACGGCGTTTACGAAGAATATTCAACCGAGCTTGCTGATGCAGATGACCGCGAAGCGCAAGAGCGTGCGAAAGCAG
CCGACAACAGAGCGAAAAAGAAATCTCGTTAA

Upstream 100 bases:

>100_bases
TAAAAAAGCGGAAAAAGCTGCTAAGCGGAAGTAGGAATACATAGCCCCTTAAAACCAAATACTATATTTGTTTGATATCA
CTTTTTAGGGGGAATTTGAT

Downstream 100 bases:

>100_bases
TGAAAAACCCCTTGTCTCCGTTTGAGACAAGGGGTTTTTTACATTTCAGTGAATCGGTCGCGGATCGGTGTGCGTTTTTT
CACTTCCGGCGCCTCGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MGRNHIHKNRDKNKQKLPQVPDALKRETDGVYEEYSTELADADDREAQERAKAADNRAKKKSR

Sequences:

>Translated_63_residues
MGRNHIHKNRDKNKQKLPQVPDALKRETDGVYEEYSTELADADDREAQERAKAADNRAKKKSR
>Mature_62_residues
GRNHIHKNRDKNKQKLPQVPDALKRETDGVYEEYSTELADADDREAQERAKAADNRAKKKSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFHD_BACSU (O31572)

Other databases:

- EMBL:   D85082
- EMBL:   AL009126
- PIR:   E69800
- RefSeq:   NP_388730.1
- EnsemblBacteria:   EBBACT00000001020
- GeneID:   939709
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU08490
- NMPDR:   fig|224308.1.peg.849
- GenoList:   BSU08490
- GeneTree:   EBGT00050000002266
- HOGENOM:   HBG343364
- OMA:   RDKNKAT
- ProtClustDB:   CLSK2752344
- BioCyc:   BSUB:BSU08490-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7322; Mature: 7191

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRNHIHKNRDKNKQKLPQVPDALKRETDGVYEEYSTELADADDREAQERAKAADNRAKK
CCCCCCCCCCCCCHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
KSR
CCC
>Mature Secondary Structure 
GRNHIHKNRDKNKQKLPQVPDALKRETDGVYEEYSTELADADDREAQERAKAADNRAKK
CCCCCCCCCCCCHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
KSR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377