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The map label for this gene is ydeJ

Identifier: 16077589

GI number: 16077589

Start: 569290

End: 569949

Strand: Reverse

Name: ydeJ

Synonym: BSU05220

Alternate gene names: 16077589

Gene position: 569949-569290 (Counterclockwise)

Preceding gene: 16077590

Following gene: 16077584

Centisome position: 13.52

GC content: 41.36

Gene sequence:

>660_bases
ATGAAGAAACGCAGAAAGATATGTTATTGCAATACTGCCCTGCTGCTTATGATTTTGCTTGCTGGATGTACGGACAGTAA
GGATGGAGAAGCACAACAACCTTCAAATCAAGCTTCTGCTGTGCAAACTGACGAAAAACACACTGAGCCTGAAGAGAGCA
CCAAAATACGCAAGGATGAAGCGGAGCCAATAACAGAATCAGAAGAATCCGCAACAAAAGCTGCAAATGATACCTCTTCA
GCAGAAGAGAAAAGCAAAGAAGACAATGTATTGGCAGCATACTCTTCGGAAAAAATTGAATATGCCAGAGTTTGGCTTCA
ACTTGGACCTAATCAAGAGATAGATGAATTAAATGTTCGACATATTGCGGCTGGCGAGCCAATTAATCCTAATGATGATA
CAAGTGCCAGCTATCCAGAAAATGTGACCCAGTTGGCAGGTTCTCGTTTAGTGGATGGATCAGTCACTTATCATGGCAAT
GGGGATGGCACAATTCATGTATATAATGTGCCTTTACGCTGGGATTCCGCTGATGATATAGAAAAAGGCGTCATGCGGGA
AGTGACTGAGAGTATCATAAAAAACAGAAAAACAGTGTACGTTGATACAGGCGACGATGAAAAAATCAAGCGGCTCATTG
ATATCATGATGATTCATTAA

Upstream 100 bases:

>100_bases
TTAAACAGTTTTCAATATCATCCTATCTATTCCATGGTAATATTTAGATACATAAACTTATATATGAAGCTGACCTGAAT
TAATAGAGAGGAATGAAAAA

Downstream 100 bases:

>100_bases
TCAGTATTCGTTTGTCTGCACCTGACTAAAAACAATGGTTAATAAGGTATATTAATACAAAAACAAAGTTTGGAGTGTAG
TAACTTGCTAAAAATCTTCC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKKRRKICYCNTALLLMILLAGCTDSKDGEAQQPSNQASAVQTDEKHTEPEESTKIRKDEAEPITESEESATKAANDTSS
AEEKSKEDNVLAAYSSEKIEYARVWLQLGPNQEIDELNVRHIAAGEPINPNDDTSASYPENVTQLAGSRLVDGSVTYHGN
GDGTIHVYNVPLRWDSADDIEKGVMREVTESIIKNRKTVYVDTGDDEKIKRLIDIMMIH

Sequences:

>Translated_219_residues
MKKRRKICYCNTALLLMILLAGCTDSKDGEAQQPSNQASAVQTDEKHTEPEESTKIRKDEAEPITESEESATKAANDTSS
AEEKSKEDNVLAAYSSEKIEYARVWLQLGPNQEIDELNVRHIAAGEPINPNDDTSASYPENVTQLAGSRLVDGSVTYHGN
GDGTIHVYNVPLRWDSADDIEKGVMREVTESIIKNRKTVYVDTGDDEKIKRLIDIMMIH
>Mature_219_residues
MKKRRKICYCNTALLLMILLAGCTDSKDGEAQQPSNQASAVQTDEKHTEPEESTKIRKDEAEPITESEESATKAANDTSS
AEEKSKEDNVLAAYSSEKIEYARVWLQLGPNQEIDELNVRHIAAGEPINPNDDTSASYPENVTQLAGSRLVDGSVTYHGN
GDGTIHVYNVPLRWDSADDIEKGVMREVTESIIKNRKTVYVDTGDDEKIKRLIDIMMIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDEJ_BACSU (P96667)

Other databases:

- EMBL:   AB001488
- EMBL:   AL009126
- PIR:   D69778
- RefSeq:   NP_388403.1
- ProteinModelPortal:   P96667
- EnsemblBacteria:   EBBACT00000000031
- GeneID:   939910
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU05220
- NMPDR:   fig|224308.1.peg.522
- GenoList:   BSU05220
- OMA:   ASENNEP
- ProtClustDB:   CLSK307941
- BioCyc:   BSUB:BSU05220-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24355; Mature: 24355

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRRKICYCNTALLLMILLAGCTDSKDGEAQQPSNQASAVQTDEKHTEPEESTKIRKDE
CCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHCCCCHHHHHHCCCC
AEPITESEESATKAANDTSSAEEKSKEDNVLAAYSSEKIEYARVWLQLGPNQEIDELNVR
CCCCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCEEEHEEEEECCCCCCCCCCCE
HIAAGEPINPNDDTSASYPENVTQLAGSRLVDGSVTYHGNGDGTIHVYNVPLRWDSADDI
EEECCCCCCCCCCCCCCCCHHHHHHHCCEEECCEEEEECCCCCEEEEEECCEECCCHHHH
EKGVMREVTESIIKNRKTVYVDTGDDEKIKRLIDIMMIH
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKRRKICYCNTALLLMILLAGCTDSKDGEAQQPSNQASAVQTDEKHTEPEESTKIRKDE
CCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHCCCCHHHHHHCCCC
AEPITESEESATKAANDTSSAEEKSKEDNVLAAYSSEKIEYARVWLQLGPNQEIDELNVR
CCCCCCCHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCEEEHEEEEECCCCCCCCCCCE
HIAAGEPINPNDDTSASYPENVTQLAGSRLVDGSVTYHGNGDGTIHVYNVPLRWDSADDI
EEECCCCCCCCCCCCCCCCHHHHHHHCCEEECCEEEEECCCCCEEEEEECCEECCCHHHH
EKGVMREVTESIIKNRKTVYVDTGDDEKIKRLIDIMMIH
HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377