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The map label for this gene is ydzE

Identifier: 16077581

GI number: 16077581

Start: 561180

End: 561416

Strand: Reverse

Name: ydzE

Synonym: BSU05140

Alternate gene names: 16077581

Gene position: 561416-561180 (Counterclockwise)

Preceding gene: 16077582

Following gene: 16077580

Centisome position: 13.32

GC content: 37.55

Gene sequence:

>237_bases
TTGTATTTGGGAATTGTTTCAACAGCTTGTGCATTTTTATTGTGGAACCACGGCTTACAATTATTAAATGCCTCAAGTGG
AGGCCTCTTTTTCTTTTTTCAGCCTCTGGTTGGAACCTTACTCGGATGGATTCTGCTTGGAGAACAAATAGGCGGGACAT
TTTGGATAGGTTCGTTTTTAATTCTGAGCGGTGTTTTATTAGTCATTAAAGAGAAAGAAAAAGAAGTGAAGTCATAA

Upstream 100 bases:

>100_bases
TAAAGTTTATTCTATTAATAAATGGAGTCCCTGTTAATGGTACTCCCCTAGCACGATTTTTACGCCACTACTGCTTGACC
CTAAAATTCTAGGTGGCCTT

Downstream 100 bases:

>100_bases
CAAAAAAAAGCAAACTATTTTATATAGTTTGCTTTTCAATTAACCTTGTTCTTTCCCCTTTACTTCTTTATGTTCTGGTC
TTCATTTATAATCTCTCCTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MYLGIVSTACAFLLWNHGLQLLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFLILSGVLLVIKEKEKEVKS

Sequences:

>Translated_78_residues
MYLGIVSTACAFLLWNHGLQLLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFLILSGVLLVIKEKEKEVKS
>Mature_78_residues
MYLGIVSTACAFLLWNHGLQLLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFLILSGVLLVIKEKEKEVKS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDZE_BACSU (O31493)

Other databases:

- EMBL:   AL009126
- PIR:   F69790
- RefSeq:   NP_388395.1
- EnsemblBacteria:   EBBACT00000001198
- GeneID:   938121
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU05140
- NMPDR:   fig|224308.1.peg.514
- GenoList:   BSU05140
- HOGENOM:   HBG349055
- OMA:   LIATSIW
- ProtClustDB:   CLSK382623
- BioCyc:   BSUB:BSU05140-MONOMER
- GO:   GO:0006810
- InterPro:   IPR000620

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 8532; Mature: 8532

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc32d358)-; HASH(0xd373d48)-; HASH(0xc94ea60)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLGIVSTACAFLLWNHGLQLLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFL
CCCHHHHHHHHHHHHHHCHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILSGVLLVIKEKEKEVKS
HHHHHHHHHHCHHHHCCH
>Mature Secondary Structure
MYLGIVSTACAFLLWNHGLQLLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFL
CCCHHHHHHHHHHHHHHCHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ILSGVLLVIKEKEKEVKS
HHHHHHHHHHCHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377